Methylocaldum marinum: sS8_4843
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Entry
sS8_4843 CDS
T05638
Name
(GenBank) PAS domain S-box
Organism
mmai
Methylocaldum marinum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
HATPase_c
PAS_4
HisKA
PAS
PAS_8
PAS_9
HATPase_c_2
PAS_10
PAS_3
HATPase_c_5
CcmH
Motif
Other DBs
NCBI-ProteinID:
BBA36766
UniProt:
A0A250KZ25
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Position
5241310..5243778
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AA seq
822 aa
AA seq
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MFSLVGAGLARAESDRPLVVGSEVGFPPYAEIDESGQPTGFAVELFAAVAKVMDISVTFR
TGPWDSIWQGLKSGELDALPLAAHLDEREGQVEFTRPHTIGYDSFFVRKGRSPVPSIGQA
RALSIIVLRSDAAHHALVSRGFTHQLVFVDSLTDGFRLLASGQHDAVLGPRLQGDRLVEA
SGLSAIIEAGPPLKDYRREFCFAVRKGDTRLRDRLDQGLAIVMASGEYDRLYGKWLGIYE
TPTFPVKYVAWGTGVIAVLLALLGLWTRQLRRQVALRTAELARAVASTQAERQRLNDVLQ
ALPVSVVLLSQDYRVVFANRFFEERYGKARNRRCYEYLFGRCAPCETCETYTVLKSGAPV
DWEWTAPDGQDYQIHDFPFPDNEGASMIMEVGIDITEMNRAKQALREANASLEQRVAART
AELEAARREAEEARDLLRVTMDNAPALMSYIDADCRYRRVNGAYERWFGHGSEQVRGRHV
REVLGDSAWRVIAPYAERALAGERVAFEISVPYAEGGMRWCHATYSPDLDAAGRVRGFVA
HVLDVTERKQAEEGLREADRRKDEFLAMLAHELRNPLAPISNAVQIMRRLGTMDSKLQWT
RDVIDRQVEHLTRLVDDLLDVSRISRGKIELKREPLELAEIVQRAVETSRPLIDARRHQF
AIHLPPQPVHVEGDLVRLAQAVSNLLNNAAKYTDEGGQISLSLESSDSDVVIRVRDTGRG
IDPVQASSLFDLFYQVDRTLDRAEGGLGIGLCLVKRLVAMHGGEIWVLSEGRGQGSEFGI
RLPRLRGSRPFIVGSVHAGSGERQVSYPGPSSLEKSDYKSGT
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
gtgttcagcctggtcggggcggggctggctcgagcggagtcggatcgtccgctggtcgtc
ggatccgaggtcggctttccgccctatgccgaaattgatgagtccggacaaccgaccgga
tttgccgtcgagctgttcgctgcggtagccaaggtaatggacattagcgtcaccttccgt
accgggccatgggattccatctggcaagggctgaagtccggcgaactcgacgcgctgccc
ctggcggcgcatcttgacgaacgtgaaggtcaggtggaattcacccggccgcataccatc
ggctatgacagtttcttcgttcgcaagggccgctcgccggttccttccatcggccaggcg
cgcgccctaagcatcatcgtcctgcgttccgatgccgctcaccatgctctcgtcagccgc
ggtttcacccatcaactggtcttcgtcgacagcctcaccgacggtttccgcctgctggcc
tccggacagcatgatgcggtgctgggaccgcggctgcagggcgacaggctggtcgaggcc
agcggtctctccgcgatcatcgaagccggtccgccgctcaaggattaccggcgcgagttt
tgtttcgccgtgcgcaagggcgatacgcgactccgcgaccggctcgaccagggcctggct
atcgtcatggccagcggcgagtatgaccggctttacggaaaatggctcggcatttacgaa
actccgacctttccggtcaagtacgtggcatggggtacgggggttattgccgttctgttg
gcgctgctgggactatggacccggcaattacgccggcaggtggcgctgaggaccgcggaa
ttggcccgagccgtcgcgtcgacacaggcggaacggcagcggctcaacgatgttttgcaa
gcgcttccggtttccgtggtcttgttgtcgcaggactaccgggtggtctttgccaaccgc
tttttcgaagagcgctacggcaaggcccggaatcggcgctgctacgaatacctgttcggc
cgctgcgcgccgtgcgagacctgcgagacctatacagtgctgaagtccggtgctccggtc
gactgggaatggaccgcaccggacggacaggattaccagatccatgattttcctttcccc
gacaatgagggggcttcgatgatcatggaggtcggcatcgacatcaccgagatgaaccgg
gccaagcaggcgctgagggaagccaatgcgtcgctggagcagcgggtggccgcacgtacg
gccgaactggaagcggcgcgacgggaagcggaagaagcgcgcgaccttctgcgcgtgacc
atggacaatgcgccggcgctgatgtcctacatcgatgcggattgtcggtaccgtcgcgtc
aacggggcctacgaacggtggttcggtcacggcagcgagcaggttcggggacgccatgtt
cgggaagtgctcggcgattccgcatggcgggtcatcgccccttatgccgagcgggcttta
gccggagagcgggttgcgttcgagatttccgtaccctacgccgaaggcggtatgcgctgg
tgtcacgccacctactccccggatcttgatgcggcggggcgggtgcgtggattcgtggcg
cacgtgctcgacgtcaccgagcgcaaacaggccgaggaggggctgcgcgaggccgaccgg
cgcaaggacgaattcctggccatgctcgcccacgagctccgcaatccgctggctccgatc
agcaacgccgttcagattatgcggagattggggacgatggattccaaactccagtggacg
cgggatgtgatcgatcgccaggttgaacatttgaccaggctggtggacgatctcctggat
gtctcccgtatcagccggggcaaaatcgagctcaagagagagccccttgagctggcggag
atcgtgcagcgggcggtagaaaccagccggccgctgatcgatgcccgccggcatcaattc
gccatacatctcccgccgcagccggtgcacgtcgagggcgacctggttcgcctggcgcag
gcggtgtcgaacttgctcaataatgccgccaagtacaccgacgagggcgggcagatcagt
ctgagccttgaatcatccgacagcgatgtcgtgattcgggtccgcgataccgggcgcggt
atcgatcccgtgcaggcatccagtctgttcgatctgttctatcaggtggaccgcaccctg
gaccgtgcggaaggaggcttgggtatcggcctgtgcctggtcaaacgcctggtggcgatg
catggcggcgagatctgggttttaagcgaggggcgggggcaaggcagcgagttcggtatc
cgtctgccgcgcctgcggggatcgcggccgttcattgtcggctcggtccatgccggtagc
ggcgagcggcaggtttcgtatcccggaccgtcttctttagaaaaatccgattataaatcg
ggtacgtaa
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