Methylocaldum marinum: sS8_4896
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Entry
sS8_4896 CDS
T05638
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
mmai
Methylocaldum marinum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
AHH
Transglut_core
Motif
Other DBs
NCBI-ProteinID:
BBA36819
UniProt:
A0A250L2N2
LinkDB
All DBs
Position
5303040..5310536
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AA seq
2498 aa
AA seq
DB search
MSFVSYLRTKPALAGLWLSLVAMSSLAATPAPQDPGALPDAVVKALLKVHEQPRNPLPER
LRQHLKEATELLAEAEAEEDQPAAGAADRLESKQYLLEAKRTEVAGLRQEVESQLDGVRE
QLRTLKLAGKVKAFDRYAKQVAQRFDRIDRALAGFAASREPTARRQALANAQTELRALYR
RGSTADVTPEAVPFPTTRLGADVKSTPAASSQKLPRYLGASSSPPDAPAYAFLLDLLGKP
AEAAAPATPSEAAACGYTGADLAATEDVVISPEIRDLAAQLGYSPVKIFQHVYNTIRFEP
YFGSLKGSVGTLYSGSGGATDQASLFIALLRASNIPARYVLGNVQVTDASNLGANGRAPR
WLGAKTYRAAALILSNNLNPQAAYLTSNTGIQLRHVWVEACLPYGNYRGAPSDQTGHRWI
PLDPSFKDKTYQAGIAGIQQAVAFDYSATGYLASRTHTLPHERYETQVDTYIKGLNPDYT
LLDVPYRGEQTARSFDILPVTLPYEVVQFVNWAGSSSPETASLPASHRYQFTLKVRDSTD
GSLMADQQVSLPSIVHQRVTLSYTPADSASQTIWNSWNGDLAGLPAGSVNLKPVLKLDGT
TLATGSGTLPLGTEHRLIMKVTLGDTTLQQPSCRNDDPNNATPDPDLHCFNKTVYVNLKA
GAHHALMAYAHQGADRLLAERAERLIQSVQGAPGAPTPANAANYDATEGELLHIALLKYL
RYVTDAGQRLGELNGISGESGIHLGLTAAGLKVDYLFDLPFAVHPSGPYIDVLGNLAHLV
KLDTTATDSATLRAEIWPTFKLWGYSASAYEHAIWQELIRTDAVSTVRGLQFAGESGGTN
PLVTLTSANIGSWSSLMDPSMNLYQGSITGFVNDGATVTVPKKTLAYTDGQPQPKTWNGA
VYMAENQTKGYIAAIINGGLGGGYSLVNTSPVPVSYPRDGYTPSTVSSVWPINSATLANG
WNAVMSWGGDPVNLATGNLYHTERDIAVPGRGLPLVFERAYNSRGPKDGPLGFGWTHSFN
HKLNFYGAEGGYVRVGWVDGTGAERFFRLPGSSVPAGSVFQAAPGVYSVLKREADGSWSL
TEKNGLRYGFESNAGITAGQVARLLTIKDRNLNTLTLSYNTGCGNVLCMVSDGPGRSLAF
TYTSGRISQVTVKAAGGSVLATHRYGYDGNGHLTSYQSPLGVAGQHGAVTYDYYTAADGQ
NLAHALKTYTLPEGEGMRFAYYLDGRVFRHQRHKHGTLLPETTTFRYQDFRRETVTVNER
GYERRHTFDANGNPVRIVDETGAAYTYAYDAANPFNRLSETDPAGLTTHYQYDSVGNVTR
ITPPSGAATEYADFTAYHAPQRIKDAQGNWTLLKYDAKGNLTDAVRLKTGQVPTAGVTPP
ASAIASWTKYAYDGNFGQPTQTKALRDFTGASLGSFAGGVGPTLTTSYDAQTLYPAQLSR
LGDKTGDGLINGSDPADTASLAFDGLGRPTQGIDADWHPVQVAYDADGRVIQGTDAIGQL
RTYRHDGDGRLIDAELKLTQAGKTRLWDSATQVYDDAGRLAQTLDAGGYATLYRYDAAGH
LTQVTDPDAYSLSFDYDPVGRWVRAYDKAEHAVRRTLDAAGRVKTVTDPNGHATTYTYWN
AAGDGRLKQVTRPKVGSFTAGRITQFDYDALGRVIRLTEQPAAGSGETARDTLRTYDALG
RLVREAGPAYTDSDPNSATFGQTIRPVTRWVYDNLSHLKEIKAGQTAANGGSGIDPDSGA
SASDTVTTQATYTVDDFGRRLTETDALGHTTAYTYDLHGNVLTRQTPNGHTVTYVWATGH
QLLSATAEDGRQVLYTRNPLGQVIRAETWSAVPSQLEVAYDYTYDAAHRLDQLTDSRGVK
TLSYAWSPGGLLDSLTDSDGGATHTLYDPVGRLIGLWAPNFDTFGLAYDAGGRLTELRYP
NGVTETLAWNADDSLQRISHKSGATTLAQSTYTYDGLGRRKTLQETVSGLPTLTYTYQYD
PLDRLTQVDNGTASQKQTYAYDIFGNRVQKQLGNPVSQTTAYQYDPAQQLTEVRNGSLTG
TLLEADLYDEVGQLTQKCTGGTVTRPNDTSCSGTSITQYGWTSFDRLGEVSGANSASFRY
DDQGRRIQKTEGGVTTNYLYDGLNLYGEYPAGNWTTPTALYVQAGLDHPLARLTGSVGSP
SAMVHYYHPDGLGSLLALTNAAGSITATQRFDAFGQKLAGTGTIPQYGYTGREPDAAGLV
YYRARYYDPNVGRFTQRDPIGYLDGINRYAYVGNNPVNLTDPQGLTAQGPLGIQFASQNG
SYYSGGQGVLDSAGSGYGPGLVANTNWPSGPPVSLAGGIRQSANPFLGSTFTRERYHVAD
ASGVIGGSPTSCGQRLCNQIGTGPGPLDILDIGTNLVAPEAKVGVGIAGAVVKGVANRAG
QLHHIATDKAIKSGYTKEFTKIFEKAGMNLNDPANRVLLEGHAGRHSPAYHDHVLQRLRD
VTQGLSGSNYEKALRSELDTLKQELLKNPDMVKGIGIK
NT seq
7497 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcgtctcgtatctccgtacgaagccggcgctcgccggtttgtggctcagcctc
gtcgcgatgtcctccctcgccgccacccccgcgccgcaggaccccggggccttgcccgat
gccgtggtcaaggcgctgctcaaagtgcacgaacagccccggaatccgctcccggaacgc
ttgcgtcagcatcttaaggaagcgacggagttgctcgccgaagccgaggccgaggaggac
cagcccgcagccggcgcggcggaccgcctggaatccaagcaatacttgctggaggccaag
cgcaccgaagtcgcggggctgcgccaggaggtggaaagccagctcgacggggttcgggag
cagctccgaacgctcaaattggccggcaaggtcaaggcgttcgaccggtatgcgaaacag
gtcgcccagcgtttcgatcggatcgaccgggctctggccgggtttgcggctagccgggag
ccgacggcacggcgccaggcgttggccaacgcccaaacggaactgcgcgccctttatcgg
cgcgggtcgacggccgacgtcacgcccgaggcggtcccgtttcccaccacccggctcggg
gccgacgtcaagtcgacgcccgcggcgtccagccagaaactaccccgctacctcggcgcc
tcgtcatcgccccccgacgccccggcctacgccttcctcctggatctcctcgggaaaccc
gccgaagccgcggcgcccgccaccccgtcggaagccgcggcctgcggctatacgggcgcg
gatctcgccgcgacggaggacgtggtcatcagcccggagatccgcgatctcgccgcgcag
ctcggctattcgccggtcaagatcttccagcacgtctacaacaccatccgcttcgaaccc
tacttcggctcgctcaaaggctcggtggggacgctctacagcggttccggcggcgccacc
gaccaggcatcgctcttcattgccctgctgcgcgcctcgaacatcccggcccgttatgtc
ctcggcaatgtccaggtcaccgacgcgtcgaatttgggcgccaacggccgcgcgccccgc
tggctcggcgccaagacctaccgggccgcggcgctcatcctctcgaacaatctgaatccg
caagccgcctacctgaccagcaacaccggcatccaactgcgccatgtctgggtcgaagcc
tgcctgccctacggcaattaccggggcgcgccgtccgaccagaccggccatcgctggatt
cctttggacccgagcttcaaggacaagacctatcaggccggtatcgccggcattcagcag
gcggttgccttcgattacagcgccaccggttatctggccagccgcacccacacgctgccc
cacgaacgctacgagacgcaggtcgacacctacatcaagggcctgaatcccgactatacc
ctgctcgacgtgccgtaccggggcgaacagaccgcccgcagcttcgacattctgccggtc
accctgccgtacgaggtggtgcaattcgtcaactgggccggctcgtcgtcgcccgagacc
gccagccttcctgcgagccaccgctatcagttcacgctcaaggtgcgggacagcacggac
ggcagtctcatggcggaccagcaggtatcgctgccctcgatcgtccaccagcgggtgacg
ctgtcctataccccggcggacagcgcttcgcaaacgatctggaatagctggaacggcgat
ctggccggtttgccggccggatcggtgaatctgaagccggtcctgaaactcgacggcact
accctggccacggggtcgggcacgcttcccctcggcacggagcatcgcctgatcatgaaa
gtgaccctgggcgacaccactctccagcaaccatcctgccgcaacgacgaccccaataat
gccacgccggatcccgaccttcattgcttcaacaagaccgtctacgtcaatttgaaggcc
ggcgcgcatcatgccttgatggcgtatgcccatcagggagcggaccgcctcctcgccgag
cgcgcggaacggttgattcaatccgtccagggcgcgcccggcgcgccgacgcccgccaac
gccgccaattacgacgcgaccgaaggcgaactcctgcatatcgcgctgttgaaatacctc
cgttatgtcaccgacgccgggcagcgcctgggcgaactcaacggcatcagcggcgaaagc
ggcattcacctggggctcaccgcggcgggcctcaaggtcgactacctgttcgacctgccg
ttcgccgtccatccctccggtccctacatcgacgtgctgggcaatctcgcacatttggtc
aagctcgacaccacggcgaccgacagcgccaccctccgcgcggaaatctggccgaccttc
aagctctggggttacagcgcctcggcttacgaacacgccatctggcaggaactgatccgg
accgatgcggtgtcgacggtacgggggctgcaattcgccggcgagtccggcggtacgaac
ccgctggtgacgttgacctcggccaatatcgggagctggtccagcctgatggaccccagc
atgaatctctatcagggcagcatcacgggtttcgtcaacgacggcgccacggtcacggtg
ccgaagaaaaccctcgcctacaccgacggtcagccccagcccaagacctggaacggcgcg
gtgtacatggccgaaaaccagaccaagggctatatcgccgccatcatcaacggcggcctc
ggcgggggctattcgctggtcaacacgagcccggtgccggtctcctacccgcgcgacggc
tacacgccgagcacggtgtcgagcgtctggccgatcaactcggcgactctcgccaacggc
tggaacgcggtcatgagctggggcggcgatccggtcaacctcgccaccggcaatctgtac
cacaccgagcgggatatcgcggtacccggccgcggcttgcccctggtgttcgaacgcgcc
tacaacagccggggacccaaggatggccccttggggttcggctggacccacagcttcaac
cataagctgaacttctacggcgccgagggcgggtatgtcagggtcggctgggtagacggc
accggggcggagcggttcttccggcttccgggcagcagcgtgccggcgggcagcgtcttc
caggccgcgccgggggtgtattcggttctgaagcgcgaggccgacggcagttggagtctg
accgagaagaacggcctccgttacggcttcgagagcaacgccggaatcaccgccggacag
gtggcgcggctcttgacgatcaaggaccgcaatctcaataccctgaccctttcctataac
accggctgcggcaatgtcttgtgcatggtcagcgacgggccggggcggtcgctggcgttc
acctacacctcagggcgcatcagccaggtgacggtgaaagccgcgggcggcagcgtgctc
gccacccaccggtacggctacgacggcaacggccatctgacgagctaccagagccccttg
ggcgtagcggggcagcacggtgccgtgacctacgactactacaccgccgccgacggccag
aatctcgctcatgccctgaagacgtataccctgccggaaggcgaagggatgcgctttgcc
tattacctggacgggcgggtgttccgccatcagcgccacaagcacggcaccctgctgccg
gaaaccaccaccttccgttaccaggatttccgccgcgagacggtgacggtcaacgagcgc
ggctacgagcggcggcataccttcgatgccaacggcaacccggtccggatcgtcgacgaa
accggcgcggcctacacctacgcttacgatgcggcgaaccccttcaaccgcctctcggag
accgatccggccgggctgaccacgcactaccagtacgacagtgtcggcaacgtcacccgg
atcaccccgccctccggcgccgccaccgagtacgccgactttaccgcctatcacgcgccg
cagcggatcaaggacgcccaagggaattggacgctcctcaaatacgacgccaagggcaat
ctcaccgacgcggtgcgcctcaagaccggccaggtgccgacggccggcgtcacgcccccg
gcctccgccatcgcgagttggacgaaatacgcgtacgacgggaacttcggccagccgacc
cagaccaaggccctccgcgactttaccggcgccagcttagggagcttcgccggcggggtc
ggtcccaccctcacgacgagctacgacgcccaaaccctctatccggcccagctcagccgg
ctgggcgacaagaccggcgacggcctgatcaacggttcggacccggccgatactgcgagc
ctggccttcgatgggctgggtagaccaacccaagggatcgacgccgactggcacccggtc
caggttgcctacgatgccgacggccgggtcatccaaggcaccgatgcgatcgggcagctt
cgaacgtaccgccacgacggcgatggccggctcatcgatgccgagctgaaactcacccag
gccggaaagacccggctctgggattccgccacccaggtctacgacgacgcagggcgcctc
gcgcaaaccctcgatgccggcggctacgccaccttgtaccggtacgatgcggccgggcac
ctcacgcaggtgaccgaccccgatgcctacagcttaagcttcgactacgaccccgtgggc
cgttgggtgcgcgcctacgacaaggccgaacatgcggtccgccgcacgctggatgccgcc
gggcgggtgaaaacggtcaccgaccccaacggccacgcgaccacttacacctactggaac
gcggccggggacggccgcctgaaacaggtgacccggccgaaggtcggcagcttcaccgcc
gggcggatcacccagttcgactacgacgccctgggccgggtgatccgactcaccgagcag
cccgcggccggttcgggcgaaaccgcccgcgataccttaaggacctacgatgccctgggc
cgcctcgtccgcgaagcgggtccggcgtataccgactcggaccccaattccgccaccttc
ggccagaccatccgccccgtcacccgctgggtctacgacaatttaagccatctcaaggaa
atcaaggccgggcagaccgccgcgaacggcggcagcggcatcgatcccgacagcggcgcc
tccgcctcggacacggtgaccacccaggcgacctacaccgtcgacgacttcggccggcgc
ttgaccgaaaccgacgccttgggccacaccaccgcctacacctacgacctccacggcaac
gtcctcacccggcagacgcccaacggtcataccgtgacctacgtctgggctaccggccat
cagctcctgtcggcgacggcggaagacggacgccaggtcctctacacccgcaatcccctg
gggcaggtcatccgcgccgaaacctggagcgcggtgccgagccagctggaagtcgcctac
gactatacctatgacgccgcgcatcggctcgatcagctaaccgacagccgcggggtcaag
actttgagctacgcctggagtcccggcggcctcttggacagtctgaccgacagcgacggc
ggagccacccacaccctctatgatcccgtcggccgcctgatcggcctctgggcgcccaac
ttcgacaccttcggcctcgcctacgacgccggcggccggttgaccgagctgcgctacccc
aacggcgtcaccgagaccctcgcctggaacgccgacgacagcctgcagcgcatcagccac
aagagcggggcgacgacgctggctcagtcgacctacacctacgacggcctcggccggcgg
aagaccctccaggagacggtctcgggcctgccgaccctgacctatacctaccaatacgat
ccgctcgaccggctcactcaggtcgacaacggcaccgcgagccagaagcaaacttatgcc
tatgacatcttcggcaaccgggtgcaaaaacagctcggcaacccggtcagccagaccacc
gcctaccagtacgaccccgcccagcagctgaccgaggtccgaaacggcagcctgaccggg
accttgctcgaagcggacctctacgatgaagtcggccagctcacccagaagtgcaccgga
ggcacggtcacgcggcccaacgacaccagctgttccggcaccagcatcactcaatacggc
tggaccagctttgaccggctgggggaggtcagcggcgccaactccgccagcttccgctat
gacgaccagggccggcggatccagaagaccgagggcggcgtcaccacgaactatctctac
gacggcctgaatctctatggcgaatatccggccggcaattggaccacgcccaccgcgctc
tatgttcaggccggtctcgatcatccgctggcccgcctcaccggcagcgtcggcagtccg
agcgccatggtccattactaccacccggacgggctcggctcgctcctggccctgaccaac
gcggccggcagcatcaccgccacccagcgcttcgacgccttcggccaaaagctggccggg
accggcacgatcccgcagtacggctacacgggaagagagcccgatgccgcggggctcgtg
tactaccgggcgcggtattacgatcccaatgtgggccgattcacccaacgcgatccgatc
ggctacctggatgggatcaaccgctatgcctacgtcggcaacaatccggtcaatctgacc
gatccgcaggggctgacggcgcaagggccgctcggcatccagtttgcctcgcagaacggc
agttattacagtggcggtcagggcgtgctggactcggccggcagcgggtacggacccgga
ctggttgccaacacaaattggccgagcggtccgcccgtgagcttggccggcggcatccgt
caaagcgccaatccctttctcggcagtacgtttacccgggaacgctaccacgtagcggat
gcctcgggagtcatcggcggttcgccgacctcgtgcggtcagcgcttgtgcaaccagatc
ggcaccgggcctggcccgctggatatcttggatattggcacgaatctggtggcgccagag
gcgaaggtcggggtagggattgccggggcggtggtaaagggggtggcaaatagggcagga
caactgcaccacatcgccaccgacaaggcgatcaagagtggctacacgaaggaattcaca
aagatattcgaaaaggccggtatgaatctcaatgatcccgctaacagggtcttgttggag
gggcatgctggcaggcattcgccggcttaccacgatcatgttcttcagcgattacgggac
gtcacacaggggctttccggcagtaattatgaaaaggctctgcgctcggaactggataca
ctcaagcaggaacttctcaagaaccctgacatggtgaaggggatcggaatcaaatga
DBGET
integrated database retrieval system
