Methylocaldum marinum: sS8_5259
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Entry
sS8_5259 CDS
T05638
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mmai
Methylocaldum marinum
Pathway
mmai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
sS8_5259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmai03400
]
sS8_5259
Enzymes [BR:
mmai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
sS8_5259
DNA repair and recombination proteins [BR:
mmai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
sS8_5259
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BBA37181
UniProt:
A0A250L1C4
LinkDB
All DBs
Position
complement(5672716..5673321)
Genome browser
AA seq
201 aa
AA seq
DB search
MRFRAPVDAEESCEQLENLARGIRRCVACRLHQSRRQAVPGEGPANAEIVVLGEGPGSKE
DATGRPFVGPAGRYLDQLFRSQGIARDRLFITNCVKCRPPENRTPRRDELKICTNLWLKQ
QIELISPKFIVLLGQIAARQMLGETATVSQLHGTVQTRNGQNYFVTYHPAAALRFDWVAV
TLKEDFEILGSRHLRHSASVR
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttagggctccggtggacgcggaagaatcctgcgaacaactcgaaaacctcgcc
cgggggattcgccggtgtgtcgcatgccggcttcaccaaagccggcggcaagcggtaccg
ggagaagggccggcgaacgctgaaatcgtggtattgggtgaaggccccggcagcaaggag
gatgcaaccggtcgtccgttcgtcggccccgcgggccgctacctggaccagctttttcga
agccagggcatcgcgcgcgaccggcttttcatcaccaattgcgtaaagtgccgcccgccg
gagaatcgaacgccccgccgcgacgaactgaaaatctgcacgaatttgtggctgaagcag
caaatcgagctgatctcgcccaagttcatagtgttgctcggacagattgccgcccgtcaa
atgctgggtgaaaccgcaaccgtgtcccaactgcacggaactgtccaaacacgcaacggc
cagaattatttcgttacctaccaccccgctgccgcgctgcgtttcgattgggttgccgtt
accctgaaagaggatttcgaaatactcggcagccgccaccttcgacacagcgcttccgtc
cggtag
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