Methylocaldum marinum: sS8_5360
Help
Entry
sS8_5360 CDS
T05638
Name
(GenBank) type I secretion target GGXGXDXXX repeat protein domain protein
Organism
mmai
Methylocaldum marinum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP
HemolysinCabind
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
BBA37279
UniProt:
A0A250L3D6
LinkDB
All DBs
Position
5765257..5767005
Genome browser
AA seq
582 aa
AA seq
DB search
MKREDGKMTDRALAPKDAPRTEPRLNVLKGCLGLVTGFWVASAYAQPAYTPRVVNNPTPR
AEAGFGASVAGVGDVNGDGKVDFLVGAPEQTVDGNPRQGRAFVLSGADRSLLYRVNNPVP
QANALFGEAVAGVGDVDGDDIPDLLVGAPQQTVKGNDRQGRVFVFSGVNGRLLYSLDTPI
PEKGAAFGTSVADANDVNGDDVPDLLVGAPGQDGPDIPGQGGAFVFSGADGRPILTLNYP
RSEGGDFGRSVAGAGDVTGDGIPDFLVGMPFLGRVGRALVLSGADGGLVHVLNVVAPEER
AFLGAAVAGIGDVSGDGVPDLLVGAPFLPIGEYGDFVFSGGAFVFNGATGELLYQVENST
PENHADFGSAVAGLDDVNGDGIPDLLVGVPGRETGDAPQGKVVIASGADGSELLVLRNPG
RQALARFGRSVAGIGDANDDGVPDLVVGAPFQDASGNRDQGRAVLFLSDAPASFTCFGVP
ATIVGTPDNDILRGTPGDDVIVGLAGNDVIDGRGGDDRICGGNGNDVIQAGAGSDRVDGG
AGNDVINMVDGVRGNDTVNGGSHVGGDVCVADRGDRIRNCNP
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgaggacggaaaaatgacagatcgggctttagccccaaaggatgctcctagg
actgaaccccggctgaatgtgttgaaaggctgtctaggtctcgtgaccgggttctgggtg
gcctcggcctacgcccagcccgcctatacgccccgtgttgtcaataatcccacgcctcgg
gccgaagcgggttttggagcatccgtggccggggtgggcgatgtgaacggagacggcaag
gtcgacttcctggtcggggcgccggagcaaaccgtggacggcaatcctcgccaaggccgg
gcctttgtcttgagcggagccgatcgaagtcttctataccgcgtgaacaacccggtgccc
caggccaacgctctcttcggcgaagccgtggccggggtgggtgatgtcgatggcgatgac
attcccgacctcctggtaggggccccccagcaaaccgtgaagggtaacgatcggcagggc
cgggtcttcgttttcagcggcgtcaacgggaggctcctttacagcctggatacgccgata
cccgagaaaggcgccgcgttcggcacctcggtggccgatgcgaacgatgtcaatggcgat
gacgttcctgacctgctggtaggtgcacccggccaagacgggcccgacatacctgggcag
ggcggggcttttgtcttcagcggggccgatgggcgtcccatcctgacgcttaactacccg
cgttccgagggtggcgatttcggccggtccgtggctggcgcgggcgacgtcaccggcgac
ggcattcccgactttctggtgggaatgcctttcctgggccgcgtgggcagagccctggtt
ctcagcggggccgacggcggcctcgttcacgtcctcaatgtggtggcgcccgaggagcgg
gccttcctgggcgcagcagtggcgggaataggtgacgtgagcggcgacggcgttcccgat
ctgttagtgggagcgccgttcctgcccataggcgaatacggggattttgtattcagcgga
ggggcattcgtattcaatggcgccaccggtgagcttttgtaccaggtggaaaactcgacg
ccggagaaccacgccgacttcggctccgccgtagccggattggacgatgtgaacggagac
ggcattcccgatctcctggtgggggtgcccggaagagaaaccggcgacgctccgcagggt
aaggtcgttatcgcgagcggggcggacggcagtgagctcctggttctccgtaacccagga
cgtcaagctcttgcccgttttggccgatccgtggcgggaattggggatgcgaacgacgac
ggcgttccagaccttgtggtaggggcgcctttccaagatgccagcggcaatcgtgaccag
ggccgggcggttcttttcctcagcgatgctcccgcttcgttcacgtgcttcggcgtgccg
gccacgatcgtcggcacgccggacaacgatatcttgcggggaacgccgggtgacgacgtg
atcgtcggcctggccggaaacgacgtgattgacggccggggaggggacgatcgtatctgt
ggcggcaacggcaatgatgtcatccaggccggcgcgggcagcgatagggtcgacggcggc
gccggaaacgacgtgatcaatatggtcgacggcgttcgcggcaacgatacggttaacggc
ggcagccacgtcggcggcgacgtctgtgtggccgaccgaggagacaggatacgcaactgt
aacccatga
DBGET
integrated database retrieval system
