Methylocaldum marinum: sS8_5493
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Entry
sS8_5493 CDS
T05638
Name
(GenBank) ABC transporter-like protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
mmai
Methylocaldum marinum
Pathway
mmai02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
sS8_5493
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmai02000
]
sS8_5493
02044 Secretion system [BR:
mmai02044
]
sS8_5493
Transporters [BR:
mmai02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
sS8_5493
Secretion system [BR:
mmai02044
]
Type I secretion system
Adhesin protein transporter
sS8_5493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_29
AAA_16
ABC_ATPase
DUF87
FtsK_SpoIIIE
ORC-CDC6-like
Peptidase_C39
AAA_28
NACHT
DLIC
Motif
Other DBs
NCBI-ProteinID:
BBA37410
UniProt:
A0A250L0J8
LinkDB
All DBs
Position
complement(5884565..5886724)
Genome browser
AA seq
719 aa
AA seq
DB search
MNNCTSTRTDAPLPPDTAHYDPLREGLRLLARQFGREIGIAELGDGMALECGRLPLPLAP
RALRRADLNARVLKRPAHALSPHLLPALLVLRDDSTLVMVEHGGDHALTISPDSNGEIKL
PFDELAKLHDGTVILAKTRYRGDERAGSFARAQEEHWLKGPLRSCWPAYAEVGIAALMAN
LLAVSTALFAMQVYDRVVPNSAFETLWILASGVILAVILEFVLRTLRAHLLDATGKRLDL
QLSSHLMDQVMQVRLSARPPSTGAFSSQVREFESVREFFTSATAGAISDLPFVVFFLAVI
AVIGGAVAWVPLAAIGLMVLPALLARGTLARLSRQNLREGAVRHGLLLESIENLETVKAT
HAEGRNLRLWEELSADISEAGIKLRSLSALLSYGAATVQQLCYVSVVIVGVYRIDDGAMS
VGALIACSILSSRAIAPMAQATNLLVRWQHVKVALEGLDQLMSAPVERPAGRRFSRKPVL
HGHYRVEGLKLRYQPETPLALDLQRFEIRAGEHVALLGGNGSGKSTLLRVLAGLADPTEG
RILLDDLGLSQIDPADRRQAIGYLPQDVALFYGTLRDNLLLDGALHEDDELLEALDAVGL
GVFVRADPLGLDMPIWSSASVSGGQRQAIGLARVLLQDPRIVLLDEPTSALDQTSETHVI
DYLNRWLAGRTLIVATHKRRLLALTERAVVLRNGRIAMDGPLRQIVSGNQINLPENAHA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactgcacctcgacaagaaccgacgctcccctccctcccgacacggcacactac
gatcccctgcgggaaggactacgtctgctcgcgcgccagttcggccgcgagatcggcatc
gccgaactcggcgacgggatggcgctcgagtgcggccgcctgccgctccctctggcgccg
cgagccttgcggcgcgccgatctgaatgcgcgggttctgaagcgcccggcccatgcactg
tccccgcacctgctgcccgcgctgctcgtactgcgtgacgacagcaccttggtcatggtc
gaacacggcggcgaccatgcgctgacaatcagtccggacagcaacggcgaaatcaagctt
ccgttcgatgaactcgccaaactgcacgacggcaccgtcattctcgccaaaacccgctac
cggggcgacgagcgcgcgggcagcttcgcacgcgcgcaggaggagcattggctgaagggg
ccattgcgttcttgttggcccgcttatgcggaagtgggtatcgccgcgctgatggcaaac
ctgctcgcggtatccaccgccctcttcgcgatgcaggtctacgaccgcgtcgtaccgaac
agtgccttcgaaacactctggatcctcgcgagcggtgtcatcctcgcggtgatcctcgaa
ttcgtgctgcgcaccttgcgcgcccatctgctcgacgccaccggcaagcggctggacctt
caattgtcttcgcacctgatggaccaggtcatgcaagtccgcctatccgcccgccccccc
tcgaccggcgcgttcagcagccaggtgcgcgagttcgaatcggtacgcgagttcttcacc
tcggctaccgcaggcgcgatcagcgatctgcccttcgtggtcttttttctcgccgtcatc
gcggtaatcggcggcgccgtagcttgggttcccttggccgcgatcggcctgatggtgctg
cccgcgctgctggcgcgcggcacgctcgcgcgtctgtccagacaaaatctgcgcgaaggc
gcggtccgacacgggctgctgctggaatcgatcgaaaatctggaaacggtaaaggcgacg
cacgccgaagggcgcaacctgcgtctttgggaggaactatcggccgacatctcggaggcc
gggatcaagctacgctcgttgtcggccctgctctcctacggcgcggcgacggttcagcag
ctgtgctacgtcagcgtcgtgatcgtcggcgtgtaccggatcgatgacggcgccatgtcg
gtcggcgcgctcatcgcctgctccatcctctcttcgcgcgcgatcgcccctatggcccag
gccaccaacctcctggtgcgctggcagcacgtcaaagtcgccctggaaggcttggatcaa
ttgatgagcgccccggtcgagcgtcccgccggacgccgcttctcgcgcaagccggtgctt
cacggccattaccgggtggaaggcttgaagctgcgctaccagcccgaaaccccgctcgca
ctcgacctgcagcggttcgagatccgtgccggcgagcacgtcgctctgctcggcggcaat
ggttccggcaagtccacgttgctgcgcgtactcgccggcctcgccgatcccaccgaggga
cggatactgctcgacgatctcgggctgagccagatcgaccccgccgaccgccgccaggcc
atcggttacctgccgcaagatgtcgcgctcttctacggcaccctgcgcgacaacctcctg
ctcgacggagctcttcatgaagacgacgaactgctcgaggcgctcgacgcggttggcttg
ggcgtcttcgtacgcgccgatcccttgggtctcgatatgccgatctggagctccgcgagc
gtctcgggcgggcagcgccaagccatcggactcgcccgcgtgctgctacaggacccacgc
atcgtgctgctcgacgaacccacgtccgcgctcgaccagaccagcgaaacccatgtcatc
gactacctgaaccggtggctcgccgggcgaacactgatcgtcgccacccacaagcgccgc
ctgctcgcgctgacggaacgcgccgtggtgttgcgcaacggacggatcgcgatggacggc
ccgctgcgccagatcgtcagcggcaatcagatcaacttgcccgagaacgcccatgcctga
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