Methylocaldum marinum: sS8_5557 Help Entry sS8_5557          CDS       T05638                                  Name (GenBank) RNA polymerase sigma-70 factor   KO K03086   RNA polymerase primary sigma factor Organism mmai  Methylocaldum marinum Pathway mmai02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:mmai00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     sS8_5557  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mmai03021]     sS8_5557 Transcription machinery [BR:mmai03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      sS8_5557 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_ner Sigma70_r3 Sigma70_r2 Sigma70_r1_1 Sigma70_r4 Sigma70_r1_2 Vac_Fusion Motif Other DBs NCBI-ProteinID:  BBA37474 UniProt:  A0A286P4A1 LinkDB All DBs Position complement(5965119..5966999) Genome browser AA seq 626 aa AA seqDB search MFTGFLDDFHKKTKTNVNQMPITTNQLMNHEHQQLQLEELIAKGKIQGYLTYSDISDHMP DEMLEPEQFEDIIGMIEDIGIDVYEEAPDAELISAPAAITEEDEEETAAVAAVLASPIDL EQKRTSDPVRIYMREMGAVDLLTREQELSIARRIEEGLDQAAHELVRCLPAMERFFKAFE SIERGGVRLSDLISGFVSPMPQPETVELEEDSEAELAEETESGPDTGQLEEKLAEFAKRH ETVLSTLREYGPKHEFTREAFDALAESFLEFKKTPQFFKELTGVLHAAAAEIREQERLIQ NLCVQQSKMPRAEFIASFVGHETSPLWLQQQLEKQAPFAETLAAHAGRIEQAQNKLARIE QVHGLSIGEIKEMNRRVSIAENHAQQAKKEMVEANLRLVISIARKYTNRGLQFPDLIQEG NIGLMRAVDKFEYHRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLNRISR QLTQELGRDPTAEELGERMGLPEDKVRAILKVTREPVSMATPVGDEGDTHLGDLIEDPYA ASPVESATTSGLRETTRKALAGLPEREAAVLRMRFGIDMSTDHTLEEVGRQFDITRERIR QIEVKALRKLRQSSGSEPLRSFLDLG NT seq 1881 nt NT seq  +upstreamnt  +downstreamnt atgttcaccggttttctcgatgatttccataaaaaaaccaaaaccaacgttaaccaaatg cctattacgacaaaccagttgatgaatcacgaacaccagcaacttcagctcgaagagctc attgccaaggggaaaatccaaggctacctgacctattcggatatcagcgaccatatgccc gatgagatgctcgaaccggagcagttcgaagatatcatcggcatgatcgaggatatcgga atcgacgtgtacgaagaagcacccgacgccgaactgatttccgcgccggccgccattacc gaggaagacgaagaagaaacggccgccgtcgcggcggtattggcttcgcccatcgatctc gaacaaaagcggacgtccgatccggtgcgcatctacatgcgcgagatgggcgccgtggac ctgctcacgcgagaacaggaattgagcatcgccagacggatcgaagaaggccttgatcag gcggcacacgaattggtgcgctgcctgcccgcaatggaacgctttttcaaggccttcgag tccattgagcggggcggcgtacgcctgtccgatctgatctcgggttttgtcagcccgatg ccgcagcccgaaacggttgagctcgaggaggattccgaagccgaattggccgaggaaacc gaaagcggtccggataccgggcaactagaggaaaaattggcggaattcgccaagcgccac gagaccgtgctcagtaccctgcgagaatacggcccgaagcacgaattcactcgagaggct ttcgacgccctggccgagagtttcctggaattcaaaaagacgcctcagtttttcaaagaa ctgaccggcgtattacatgccgctgccgccgaaattcgcgagcaggaaaggctgatccag aacctctgcgtgcaacaaagcaaaatgccgcgtgcggagttcatcgcttctttcgtcgga cacgaaacttctccgctctggctgcagcaacagttggaaaagcaagcacccttcgcggaa accctggcggcacacgccggaagaatcgaacaggctcaaaacaaattggctcgaatcgag caggtccatggcctatcgatcggcgaaatcaaggaaatgaacagacgcgtctctattgcc gaaaatcacgcgcagcaggcgaaaaaggaaatggtcgaagcgaatctgcggctggtgatc tccattgccagaaagtacaccaatcggggacttcaatttcccgatctgatccaggaaggc aatatcggcctgatgagggctgtggacaagttcgaataccaccgtggatataagttttcc acctacgccacgtggtggattcgccaggcgatcacccgagccatcgccgaccaggcgcgg accattcgcatcccggtacacatgatagaaacgatcaataagctgaaccggatttcgcgt cagctgacccaagagttgggacgcgaccccacggcggaagagctgggagagcgtatggga ctgcccgaggacaaggtgcgcgcgatactcaaagtcacccgggaacccgtttcgatggca acccccgtcggggacgaaggggacacccatctcggcgatctcatcgaagatccgtatgcc gcctcgcctgtcgagtcagcgacgacttcgggtctgcgcgaaaccacccggaaagccctg gccggtctgcccgaacgggaagcggctgtcctgcgcatgcgtttcggcatcgacatgagc accgaccataccctggaggaagtcggcagacagttcgacatcacccgcgagcgcatccgg cagatcgaggtaaaagcgctgcgcaagcttcgccaatcctcgggatcggaaccgctgcgg agtttcctcgatctgggctga

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