Methylocaldum marinum: sS8_5623
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Entry
sS8_5623 CDS
T05638
Name
(GenBank) long-chain fatty acid CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mmai
Methylocaldum marinum
Pathway
mmai00061
Fatty acid biosynthesis
mmai00071
Fatty acid degradation
mmai01100
Metabolic pathways
mmai01212
Fatty acid metabolism
mmai02024
Quorum sensing
mmai04146
Peroxisome
Module
mmai_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
sS8_5623
00071 Fatty acid degradation
sS8_5623
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
sS8_5623
09145 Cellular community - prokaryotes
02024 Quorum sensing
sS8_5623
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mmai01004
]
sS8_5623
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmai04147
]
sS8_5623
Enzymes [BR:
mmai01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
sS8_5623
Lipid biosynthesis proteins [BR:
mmai01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
sS8_5623
Exosome [BR:
mmai04147
]
Exosomal proteins
Exosomal proteins of breast milk
sS8_5623
Exosomal proteins of breast cancer cells
sS8_5623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BBA37540
UniProt:
A0A286P4G1
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All DBs
Position
6041709..6043133
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AA seq
474 aa
AA seq
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MAAALAAGGVDKGDRVALYCPNSAEFAIAYTGIVKAGATVVPINLLLNTEEIGFILDDSG
AKGLIFHQAFAKQAQSVLQDAPGIGLRVCIGGEAEGATTFDAFLHTDAPIPEIECDPQED
LVVILYTSGTTGRPKGAMLTHGNLVANTRSIREAMRWRPGLDVVLLVLPMFHAFAATVGM
LTPLTNGCAFVPLPRFEPDQVADAIHASRATIFLGVPSMYSVLLRLKDERVPLLSTIRYC
VSGGAALPVELLRRFEEKFDIRIYEGDGPTECSPVTCVNPIDGLIKPGTVGLPLPGVEMK
IIDDEGHDLACGEVGEIAVRGANVMKGYWKQADATREVFRGEWFLTGDLGMRDEDGYFSI
VDRKKDLIIVNGMNVYPRMIEEVLYRFPPIREAAVVGEQHDLHGEIPVAYVAIDESTPTT
EAEVRAFCREHLGRHQVPRKIVFQPELPKNAAGKILKRQLRKQGEIERGVRDLE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccctggcggccggcggtgtggacaaaggggaccgggtcgcgctttactgt
ccgaactccgcggaattcgccatcgcctacaccggcatcgtgaaagcgggagcgaccgtg
gtgccgatcaatctgcttttgaatacggaagaaatcggcttcattctcgacgattccggc
gccaagggcctgatcttccaccaggcgtttgcgaaacaggcgcagtcggtgcttcaggat
gctcccgggatagggcttcgcgtttgtatcggcggcgaggcagagggcgccaccactttc
gatgcgttcttgcacacggatgcgccgattccggagatcgagtgcgacccgcaagaggat
ctggtcgtcattctctatacctcgggcaccaccgggcgtcccaagggggcgatgctgacc
cacggcaacctggttgccaacacccggagcatccgggaagccatgcgttggcgccccggg
ctggacgtcgtccttctggttctcccgatgtttcatgccttcgctgccacggtcggcatg
ctcacgccgctgaccaacggctgcgctttcgttcccctcccgcgattcgagcccgatcag
gttgccgatgccatacacgccagtcgggccacgattttcctgggcgtgcccagcatgtac
tcggttttgttgcggctcaaggacgagcgcgtgccgctgctttcgacgattcgctattgc
gtttccggcggtgccgcgctcccggtcgagcttctgcggcgtttcgaagaaaaattcgat
atccggatctacgagggcgacggaccgactgaatgctcgccggtgacctgcgtgaatccc
atcgacggactcattaaaccgggaaccgtgggtttgccgctaccgggcgtcgaaatgaaa
atcatcgacgatgaggggcacgatttggcttgcggcgaggtgggcgagatcgccgtgcgc
ggcgctaacgtgatgaaaggatactggaagcaagctgatgcgacgcgcgaggtttttcgc
ggcgaatggtttctgaccggcgatctggggatgcgcgacgaagatggttatttcagtatc
gtcgatcgcaagaaggacctgatcatcgtcaacggcatgaatgtctatccgcgcatgatc
gaagaggtgctttaccgttttccgccgattcgcgaggctgcggtggtcggggagcagcat
gatttgcacggcgaaattccggttgcctacgtcgcgatcgatgaatcgacgccgaccacg
gaagccgaagtgcgcgccttctgccgggaacatctagggcgccaccaggttccccgcaag
atcgtgtttcagccggaattgcccaaaaacgccgcgggcaagatcctcaagcggcagctt
cgcaagcagggcgaaatcgagcgcggcgttcgggatcttgaatag
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