Methanosarcina mangrovi: ACSAZL_03935
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Entry
ACSAZL_03935 CDS
T11673
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mmaj
Methanosarcina mangrovi
Pathway
mmaj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
ACSAZL_03935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmaj03019
]
ACSAZL_03935
03009 Ribosome biogenesis [BR:
mmaj03009
]
ACSAZL_03935
04131 Membrane trafficking [BR:
mmaj04131
]
ACSAZL_03935
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmaj04147
]
ACSAZL_03935
Messenger RNA biogenesis [BR:
mmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
ACSAZL_03935
Ribosome biogenesis [BR:
mmaj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
ACSAZL_03935
Membrane trafficking [BR:
mmaj04131
]
SNARE
SNARE associated proteins
Others
ACSAZL_03935
Autophagy
Aggrephagy
Other aggrephagy associated proteins
ACSAZL_03935
Exosome [BR:
mmaj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ACSAZL_03935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_5
AAA_16
AAA_22
AAA_14
TIP49
AAA_2
AAA_25
IstB_IS21
AAA_33
AAA_28
AAA_7
nSTAND3
RNA_helicase
Mg_chelatase
Sigma54_activat
AAA_18
Parvo_NS1
ATPase
NPHP3_N
AAA_17
DUF5906
Zeta_toxin
AAA_24
PhoH
NB-ARC
SLFN-g3_helicase
ABC_tran
TsaE
bpMoxR
DUF815
nSTAND_NTPase5
Vps4_C
ResIII
AAA_lid_PRS2_C
DapH_N
Motif
Other DBs
NCBI-ProteinID:
XYY90222
LinkDB
All DBs
Position
complement(814374..816746)
Genome browser
AA seq
790 aa
AA seq
DB search
MEEIQLKVEKAYPIDLGRGIIRLDPTALLKLQLSPGDIVEIRGKKKTTAKVWRADRQDWE
QGIVRIDNFIRQNAGVSIGEKVTIKKVEAPEAKKLVLALPESMTQGGPELQFGEHANEII
KRHILKRPVFKGDIIPIINSMSQPMTESLTTSQVIPLVAVETDPANTIVLITETTNIELR
KKPVQGYEKATRGVTTYEDIGGLGQEIMRVREMIEMPMKHPELFAHLNIEPPKGVILYGP
PGTGKTLIAKAVANESGASFHYIAGPEIVGKFYGESEERLRKIFEEATQDAPSVIFIDEI
DSIAPKRENVTGEVERRVVAQLLTLLDGMEERGQVVVIGATNRVDAIDPALRRPGRFDRE
IHIGVPDTKDRYEILQIHTRGMPIEKDDEIMPAEPEVEVEVELEAATEIEAGIEVDEAAL
EREKKEKTNRYLMYLAERTQGFVGADLLALVQEAAMRCLRENLPDLDIEKETIPPERLEK
IVVTKKNFEDALMEAEPSALREIFVEMPSVGWDGVGGLDEAKNAIIEAVEWPIKNPEKFV
KMGIKAPKGILLYGPPGTGKTLIAQAVARESNANFISVKGPEMFSKWLGESEKAIRETFK
KARQVAPCVVFFDEIDSIAAMQGMESTDSRTSERVLNQLLTEMDGLETLKDVVIIAATNR
PNLLDPAIMRPGRFDRLVYVGAPDRKGRMKIFKIHTRNTPLSEDVDLENLANITEGYVGA
DIEAVCREAVMFALRENFDVEAIEMRHFREALKKVKPTINENIAQFYEKIEEQFKGGQRP
AETAGYVGYR
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatacagttgaaggttgaaaaggcataccctatcgaccttggaagaggaatt
atccggcttgaccctacagcgctactgaaacttcagctctctcccggcgacattgtagag
attagggggaagaaaaagaccacagcaaaggtatggagagcagaccggcaggattgggaa
cagggaatagtgcgcattgataatttcatccggcagaacgccggagtttccatcggggag
aaggtgaccattaaaaaggtcgaagccccggaagcaaaaaagctcgttctggcacttccg
gaaagcatgacccagggaggacctgaactgcaatttggggagcatgcgaatgagattata
aagcggcatatcctgaaaaggcctgtattcaagggagacataattccgattattaattcg
atgtctcagccaatgaccgagtccctgacaacaagccaggtaatcccgctggtggctgtt
gagacggaccctgcaaacaccattgtcctgatcacggaaaccactaatatcgagctccgg
aaaaagccggtacagggctacgaaaaagctaccagaggcgtcaccacctacgaagatata
ggcgggcttggccaggagataatgcgtgtccgggaaatgatagagatgccgatgaagcac
ccggaactctttgcccacctcaatatagagcctccgaagggagttatcctctacggccct
cccggaacgggaaagaccctgatcgcaaaagccgtggcaaacgaatccggggcaagcttc
cattacattgcagggcccgaaatcgtcggaaagttctacggggaaagcgaggaaaggctg
aggaagatctttgaagaagcaacccaggacgctccttcggttattttcattgatgaaatc
gattccattgctcccaaaagggaaaacgtaaccggagaagtggaaaggcgagtggttgcc
cagctccttaccctccttgacgggatggaggaaagagggcaggtcgtggttataggggct
accaaccgtgtggatgcaatcgaccccgcactcaggagaccggggcgctttgacagggaa
atccacattggagtgccggataccaaagacaggtatgagatcctgcagatccacacccgg
ggcatgccaatcgaaaaagatgacgaaatcatgccagcagagcccgaagtcgaagtcgaa
gtcgaacttgaagcagcgactgaaatcgaagctggaatagaagtcgatgaagctgccctg
gagagggaaaagaaagagaagacaaaccgctacctcatgtatctggctgagaggacgcag
ggctttgtgggagcagaccttctggctctcgtacaggaagcagcaatgcgctgcctcagg
gaaaacctgcctgacctcgacattgaaaaagaaacaatccctcccgaacggctggaaaaa
attgttgtaaccaagaagaacttcgaagatgccctgatggaagccgaaccctcagccctt
agagagatctttgttgagatgccttcggttggctgggacggcgtgggaggcctggatgaa
gcaaagaatgcgatcatcgaagcagtcgagtggcccattaaaaacccggaaaaatttgtc
aaaatgggcataaaagctccgaagggaatcctgctttacggcccacccggaacaggaaag
actctgatagcccaggctgtagccagagagtcaaacgccaatttcataagcgtcaaaggg
ccggagatgttttcgaagtggctcggggagtcggaaaaagcaatcagagaaaccttcaag
aaagcaaggcaggttgctccctgtgttgtcttctttgatgagatcgactccattgctgcc
atgcagggcatggaatctacggacagtcggacttcggaaagggtgctcaaccagctgctg
accgaaatggacgggcttgagaccctcaaggacgtggtaataattgccgcaaccaaccgc
cctaacctgcttgaccccgcaatcatgcgtccgggccgctttgacaggctggtttacgtt
ggtgcgcctgaccgtaaaggcagaatgaagatctttaagatccacacaaggaataccccg
ctttcggaggacgtggaccttgaaaaccttgccaatataacggaaggatacgtgggtgct
gacatagaagcagtatgcagagaggctgtaatgtttgccctcagagagaacttcgatgta
gaagcaattgagatgaggcacttcagggaagccctcaagaaagtaaaacccacaatcaac
gaaaacattgcacagttctatgagaagatagaggagcagtttaagggaggccagagaccg
gcagagacagccggatatgtgggatacaggtaa
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