Methanosarcina mangrovi: ACSAZL_16125
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Entry
ACSAZL_16125 CDS
T11673
Name
(GenBank) PKD domain-containing protein
Organism
mmaj Methanosarcina mangrovi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_4
PKD
YNCE
Beta-prop_THOC3
PKD_3
Lactonase
choice_anch_I
Cytochrom_D1
InlK_D3
Vgb_lyase
Beta-prop_EML_2
NHL
SGL
Arylesterase
WDR55
Beta-prop_ACSF4
Tricorn_2nd
WD40_Prp19
Beta-prop_WDR3_2nd
X25_BaPul_like
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_1st
Motif
Other DBs
NCBI-ProteinID:
XYY88367
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Position
3634936..3639939
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AA seq
1667 aa
AA seq
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MKGKKCNKIFRGQTFNKALGIAALAFLMLVSIAGASSFAYITNEGSNSISVIDTATNKVT
ATIPVGANPVGVAINPNGTKVYVANDHSNDVSVIDTATNAVTVTVPAGRSPQGVAVSPDG
KKVYVTNLASNTISVIDTATNTVVSTVKTGGSPTGVVVSPDGKKIYVTNNGDKTVSIIDT
ATKAVISTVTVGKGPGEIAVTPDGAKVYVANSDGGSISVIDTATNSVTDTVKVEGAPFGI
AVTPDGTKVYVTNNDKYFSTVSVIDVSTNEVAATIPVGPNPAGAAVTPDGTKVYVTINLC
NTVSVIDTATNTVTATMLVGKSPYASGQFIGSIPVQPVYPLANFRSNITSDYVFLSVPVR
FTDLSENVTGWIWDFGDGSGSTEQNPTHTYSAAGIYTVNLTVSNPNGTDSKLATVNVIPK
GSPAPSYAFITNLNSNTVSVINTGSNNLTATVPVGIGPLGVVASPDGTRVYVTNSNYGYR
GTVSVIDTAINEVTATVDVGDKYSPCGIAVTPDGKKLYVADRDINGVSVIDTSTNTVTAT
ISAGINPLGVVVTPDGTRVYVTNRYSNTVSVIDTATNKVIATAKTGLGPCGVTINRAGTK
LYVTNCESNTISIIDTGSNTVTATVPAGKWPMGVAVTPDGTKAYVANERSNNVSVIDTAT
KTDIAAVKVGKNPYGIAVTPDGTKVYVANCGNSDDPGNTVSIIDTTTNKVTATVKTGFSP
VAFGQFISPLPAQPVLPVANFSSSLTSGYAPLSVQFTDFSKNVERWNWDFGDGTNSTDQN
PAHTYSTAGNYKVTLTVNNKNGTDSKFATVTVLAHPVFSAATTSGKTPLSVSFTDQSTGS
PASWNWTFGDGTYSTEKNPVHVYRKSGKYSVTLTLNETGDRSAVTKYSYITVSNGYETPV
ASFSASPASGEAPLTVSFTDQSTGSPTSRKWNFGDGTHSTAEKPVHRYSKAGSYSVTLTV
SNEKGSNTLTKSSCIVVSNDLNGPVTSFSASRTSGKVPLIIDFTGQAKGSPTSWKWAFGD
GNTSTDKNPVHTFNKSGLYSVRLTASNEKGSNTLIKTGYIAVSGVSAVPVSKFSASLTSG
KAPLTVSFTDQSTGSPTAWKWFFGDGNNSTDKNPVHKYNESGLYSVRLTVSNANGSNTLT
KAGYIAVPGVLNTPVTSFSASRTSGKAPLTVSFTDQSTGSPASWKWFFGDGSDSTEKNPV
HTYNKSGNYTVALTTTNEGGSNKVQKTNYISVVSESGTVTSNPGYIIPFTAFSATPTTGS
MPLTVSFTDQSTGSPASWKWNFGDGNGSTEKNPVHTYNKSGKYSVTLTASNANGSNALTK
YGYIVVSNVLNGPVTSFSASQTSGNMPLTVHFTDRSTGSPASWKWNFGDGNGSTEKNPVH
TYNKSGKYSVTLTASDANGSNALTKSGYIVVSNVLNGPVTSFSASSTSGKAPHTVRFTDQ
STGSPAAWKWTFGDGSNSTTEQNPVHTYNKSGLYSVTLTASNANGSNSLTKSSYIAVSSV
LDTPVTSFSASPTSGSTPLTVVFTDQSTGFPTSWKWNFGDGSNSTTEQNPVHTYNKSGLY
SVTLTASNANGSNTLKKSSYIAVSNSLVAAFSASPTSGPLPFSVSFTDKSTGSPAAWKWA
FGDGNTSTEQNPVYIYNKTGRYTVSLTVNNSESISTETRSRYIVISK
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaaagaaatgtaataaaatatttagggggcagaccttcaataaagctttaggg
atagcagcacttgcttttttaatgttggtgagtatcgcaggcgcctcgtcatttgcatac
attacaaatgaaggaagtaacagcatctctgtaattgacacagcaacaaacaaagttaca
gctacgatacccgtaggagccaatcctgtcggagttgcaattaatccgaatggaacaaag
gtatatgtggcaaatgatcatagcaacgatgtatctgtaattgacacggcaacaaatgct
gttacagtcacggtgcctgcaggaaggtctcctcagggggttgcagtcagtccagatgga
aaaaaggtatatgtgacaaacctggcaagtaacactatttccgtaattgatactgccaca
aatactgttgtaagtacagtgaaaacagggggatcccccacaggagtagtggtaagtcca
gatggaaaaaagatatatgtaacaaataacggggataaaaccgtctctataattgacact
gccacaaaggctgttataagcacggtaactgtcggaaaaggtcctggggaaattgcggtc
acaccggacggggctaaagtatacgtagcgaactccgatggagggagcatctctgtaatt
gacacggcaacaaacagtgttacagatactgtgaaggtagagggagctccttttggaatt
gcagtcacaccggacggaacaaaggtatacgtgactaataatgataaatatttcagcacg
gtctctgtaattgatgtttctacaaacgaagttgcagccacaatacctgtaggtcccaat
cctgcaggagctgcagtcacaccggacggaacaaaagtatatgtaacaatcaatctctgc
aacaccgtctctgtaattgacaccgcgaccaacaccgttacagccaccatgcttgtaggg
aagagtccttacgcttcaggccagtttataggttctatcccggtacaaccagtttatcct
ttagcgaacttcagaagcaacatcacatctgattatgttttcctttccgtacctgtgcgg
tttacggatctatcggagaatgtaaccggatggatctgggactttggagacgggtctggt
tcaacagagcagaatcccacgcatacctattctgcagcaggaatctatactgttaacctg
acagtaagcaatccaaacggcacggattcaaagctcgctacggtaaatgttataccaaag
ggttctcccgcaccttcatatgcatttattacgaaccttaacagcaacactgtttctgta
ataaacacgggaagcaacaaccttacagccacggtgccggtaggaatcggtcctctggga
gttgtagcaagcccggatggaacaagggtatatgtgactaactctaactacggctaccgt
ggtactgtctctgtaattgacacagccataaacgaggttacagccaccgtggatgtagga
gataaatacagtccatgcggaattgcggtaacgccggacggaaaaaaactatatgtggcg
gatcgtgatatcaacggtgtttctgtaattgacacatctacaaatacggttacagccacg
atatctgcaggaattaaccctttaggggttgtagttacaccggatggaacaagagtatat
gtaacgaaccgttacagcaacactgtttctgtaattgacacagccacaaacaaagtcata
gctactgcgaaaaccggactcggcccctgtggagttacaataaaccgggcgggaacaaaa
ctatatgtgacgaattgtgaaagtaacactatttctataattgacacgggttcaaatact
gttacagccacagtgcctgcaggaaaatggcctatgggagttgcagtcacaccggacgga
acaaaagcatatgtggcaaatgaacgcagtaacaatgtctccgtaattgacaccgcaaca
aaaactgatatagctgctgtgaaagtcggaaaaaatccatacggaattgcagtcacaccg
gacggaacaaaggtatatgtagcgaactgtggcaacagcgatgaccccggaaatactgtc
tctataattgacacgaccacaaacaaggttacagcgacggtaaaaacaggtttcagtcct
gttgctttcggtcagtttataagtcctctcccggcacaaccggtacttcctgttgcaaac
tttagcagcagtctcacatccggttatgctcctctttctgtccagtttacggatttctcg
aagaatgtggagagatggaactgggactttggagacggaactaattccacagatcaaaat
ccagcgcatacttactccacagcagggaattacaaagtaacgcttacagtaaacaataaa
aacggtactgattcgaaatttgccacagtaaccgttctggcacacccagtattttccgca
gccacaacttccggaaaaacgcctctcagtgttagttttaccgaccagagcacaggatcg
ccagcgtcatggaactggacttttggagatggaacttattcaacggaaaagaatcccgta
catgtatatagaaaatcaggaaagtattctgttacgttgacattaaacgaaacaggggac
aggagtgcggtaacaaaatacagctatattactgtttcaaacgggtatgaaacccctgtt
gcttcattttctgcatctccagcttcaggagaagcgcctcttaccgtaagttttactgac
cagagtacaggttctccgacctcaaggaagtggaatttcggagacggcacgcattcaaca
gcggagaaacctgtacacaggtacagcaaagcaggatcatactctgttacattaacagta
agtaatgaaaaaggcagcaatacgttaacaaagtcaagctgtattgttgtttcaaacgat
ttaaatggtcctgtcaccagcttctctgcatctcggacttcaggaaaagtgcctcttatt
attgattttacaggccaggccaaaggatctccaacgtcatggaaatgggctttcggagat
gggaatacttcaacagataaaaatcccgtacacacattcaataaatcaggactatattct
gttagattgacagcaagtaatgaaaaaggcagtaacacgttgattaaaaccggttatatt
gctgtctcaggcgtttcagctgtccctgtttccaaattctctgcgtcccttacttcagga
aaagcgcctcttactgtaagttttactgaccagagcacagggtcaccaactgcatggaaa
tggtttttcggagatgggaataattccacagataaaaatcctgtacataaatacaatgaa
tcaggactatattctgtcagattgacagtaagtaatgcaaacggcagtaatacgttgact
aaagccggctatattgctgttccaggcgttttaaatactcctgtcaccagcttctctgcg
tcccggacttcaggaaaagctcctcttacagttagttttactgaccagagcacaggatca
ccagcgtcatggaaatggtttttcggagatggaagtgattcaacggaaaagaatcccgta
cacacatacaataaatcaggaaattatactgtcgctttgacaacgactaatgaaggaggc
agtaataaggtacaaaaaacaaactatataagtgtagtttccgaaagcggtactgtaacg
tcgaatccaggctatattatccccttcaccgccttttcagcaactccaactacaggaagt
atgcctctcactgtcagttttactgaccagagcacagggtcaccagcgtcatggaaatgg
aatttcggggatggaaatggttcaacagaaaagaatcccgtacacacatacaataaatca
ggaaaatattctgttacattgacagcaagcaatgcaaacggcagcaatgcgttgacaaaa
tacggttatattgttgtttcaaacgttttaaatggtcctgtcaccagtttctctgcgtct
cagacttcaggaaacatgcctcttaccgttcactttactgaccggagcacagggtcacca
gcgtcatggaaatggaatttcggggatggaaatggttcaacagaaaagaatcccgtacac
acatacaataaatcaggaaaatattctgttacattgacagcaagcgatgcaaacggcagc
aatgcgttgacaaaatccggctatattgttgtttcaaacgttttaaacggtcccgtcacc
agcttctctgcatcttctacttcaggaaaagcaccacataccgttcgttttactgaccag
agcacagggtcaccagccgcatggaaatggacttttggagacggaagtaattcaacaaca
gaacagaatcctgtgcacacatacaataagtcaggactttattccgttactttgacagca
agtaatgcaaatggcagtaattcgttgacaaaatccagctatattgctgtctcaagtgtt
ttagatactcctgtcaccagtttctccgcatcccccacttcaggaagtacccctcttact
gttgtttttactgatcagagcacaggatttccaacgtcatggaaatggaatttcggagat
ggaagtaactcaacaacagaacagaatcctgtacacacatacaataaatcaggactttac
tctgttacattgacagcaagtaatgcaaacggcagcaatacgttaaaaaaatccagttat
attgcggtttcaaactcccttgtcgctgctttttctgcatctccaacttcagggccttta
ccgttcagtgtcagctttactgacaaaagcaccggatcgccagctgcatggaaatgggct
tttggcgatggaaatacttcaacagaacaaaatcctgtatacatatacaataaaacagga
cgatatactgtcagtttaacggtaaataattcagaaagcatcagtactgaaaccaggtcc
agatacatcgtaattagtaagtaa
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integrated database retrieval system