Methanococcus maripaludis KA1: MMKA1_00140
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Entry
MMKA1_00140 CDS
T03692
Symbol
truD
Name
(GenBank) putative tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mmak
Methanococcus maripaludis KA1
Brite
KEGG Orthology (KO) [BR:
mmak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmak03016
]
MMKA1_00140 (truD)
Enzymes [BR:
mmak01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MMKA1_00140 (truD)
Transfer RNA biogenesis [BR:
mmak03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MMKA1_00140 (truD)
Prokaryotic type
MMKA1_00140 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
ATP13
DUF4211
Motif
Other DBs
NCBI-ProteinID:
BAP60131
UniProt:
A0A2Z5PSE8
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All DBs
Position
complement(19026..20195)
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AA seq
389 aa
AA seq
DB search
MKFRQKHEDFIVNEILDYELNDNGNYSLYTLQKNGIENLKAISYLSKNFEVPTKEIGYCG
LKDRHAITTQYVSIPKEYGKLSLDEDNLKLEYVGTIEKPLKIGRLYGNRFEIIARAVDKD
EFLKIADNIRNLSSGAPNYYDDQRFGSVFNGKFIAKEILKGNYEEVVKILLTSYTKSEKK
QLKDLKRFIAKNWGNWDECLEYIDKKQIRSKMFRNMVKSLTYENDFKKAFKYVDNRLKEL
FISAYQSYLWNECLKEFLKEVIPKENRIYVDYSCGTFLFYENIEEELFCKLKEMDFPTIV
SDVEYSDSEKRIIKAILKKERIKISDFEKLDFGKLKYTKRPIISIPGDVNTGKFKSDELN
SKKYKIDLEFSLKKGSYATIILKRVFNIL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagacaaaaacacgaagatttcatcgtaaatgagattttagattatgaatta
aatgataatggaaattattcgttatatacgcttcaaaaaaacggaatagagaatttaaaa
gctatatcgtatctttcaaaaaactttgaagttcctacaaaagaaattggttactgcggt
ttgaaggacaggcacgcaatcacaactcaatatgtttccattccaaaagaatacggtaaa
ttatcccttgacgaagataatttaaagcttgaatacgttggaaccattgaaaaaccctta
aaaattggaagattgtatggaaaccggtttgaaatcatagcaagggctgtcgataaagac
gaatttttaaagattgcagacaatatacgaaatttaagttctggagcgccaaattactac
gatgatcagagatttggaagtgtatttaacggtaaatttatagcgaaggagattttgaaa
ggcaattatgaagaagtcgttaaaatacttttaacaagctatacgaaaagtgagaaaaag
cagttaaaggatttaaaacgatttattgctaaaaattggggtaactgggatgaatgctta
gaatatatcgataagaagcagataagaagtaaaatgtttagaaatatggtaaagtcatta
acctacgaaaatgattttaaaaaagcgtttaaatacgtagataatcggttaaaagagctt
ttcatttctgcatatcaaagttacctttggaatgaatgcttaaaagagtttttaaaagaa
gttattccaaaagaaaatagaatatatgtcgattattcctgcgggacatttttgttttac
gaaaatattgaagaagaattgttttgtaaattaaaagaaatggattttccaacgatagtt
tcagacgtagaatactctgattcagaaaaaagaataataaaggcaattttgaaaaaagaa
cggattaaaatttcagattttgaaaagttagattttggaaaattaaaatacacaaaaaga
ccgattatttcaattcctggagatgtcaatactggaaagtttaaatctgacgaattaaac
tcaaaaaagtacaaaatagatttagaatttagtttaaagaaaggaagctacgcaactata
attttaaaaagggtttttaatattttataa
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