Methanococcus maripaludis KA1: MMKA1_00380
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Entry
MMKA1_00380 CDS
T03692
Symbol
tfe
Name
(GenBank) transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mmak
Methanococcus maripaludis KA1
Pathway
mmak03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmak00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MMKA1_00380 (tfe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmak03021
]
MMKA1_00380 (tfe)
Transcription machinery [BR:
mmak03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
MMKA1_00380 (tfe)
Prokaryotic type
Archaeal type
TFE
MMKA1_00380 (tfe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HypA
Zn_Ribbon_TF
HTH_9
DnaD_N
Zn_ribbon_ACC
TrmB
HTH_Cmi2_C
DUF5033
HVO_2753_ZBP
HTH_34
HTH_IclR
HTH_20
Zn_ribbon_RPB9
Rrf2
zf-C2H2_FBX41
Motif
Other DBs
NCBI-ProteinID:
BAP60155
UniProt:
A0A2Z5PGH2
LinkDB
All DBs
Position
48780..49337
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AA seq
185 aa
AA seq
DB search
MNLSKDEIFTMLENPLIQQVLFEIMDEDVVGFDVLSVLINTNEVTDDEISRQLDVKLNNI
RRILYKLYEARLVDYNREKDEETNWYTYTWKPSLEKVPALVAKKMKNVLNGLKEQLNVEE
NNMFFFCSDCEIKFTFEDAMDSGFRCPQCGEMMYEYDNKKDISLLKEQIKYLEDEFNKNP
LFSTY
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcaaaagatgagatatttacaatgctcgagaaccccctgattcaacaagta
cttttcgaaataatggatgaggacgttgttggttttgatgttttgtcagtacttatcaat
actaatgaagtaacagatgacgagatttcaagacagttggatgtaaaattaaacaatatt
agaaggatactctacaaattatacgaagcaaggcttgtagattataatcgagaaaaggac
gaagaaacaaactggtacacttacacctggaaaccatctcttgaaaaagtgccagcactg
gttgctaaaaaaatgaaaaatgtactaaatggtttaaaagaacagctaaatgtggaagaa
aataacatgttttttttctgttctgactgtgaaattaaatttacatttgaagatgcgatg
gatagtggatttagatgcccccaatgtggcgagatgatgtatgaatacgataataaaaag
gacatttcactattaaaagaacagattaaatatttagaggacgaatttaataaaaaccct
cttttttctacttattaa
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