KEGG   Methanococcus maripaludis KA1: MMKA1_00460
Entry
MMKA1_00460       CDS       T03692                                 
Name
(GenBank) beta-lactamase like-protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mmak  Methanococcus maripaludis KA1
Pathway
mmak03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmak00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MMKA1_00460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmak03019]
    MMKA1_00460
Messenger RNA biogenesis [BR:mmak03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MMKA1_00460
SSDB
Motif
Pfam: RNase_J_b_CASP RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 PDEase_II
Other DBs
NCBI-ProteinID: BAP60163
UniProt: A0A2Z5PE50
LinkDB
Position
56555..57901
AA seq 448 aa
MQLEVVAIGGYEEVGRNMTAVNIDGEIIIFDMGVRLDRIMIHEDTDISKMHSLNLIEMGV
IPDDTVMKNIEGEVKAIVLTHGHLDHIGAITKLAHRYNAPIIGTPYTLELVKREILSEKK
FDVRNPLITLENGNKLDLTANITLEFVKITHSIPDAAMAVLHTPHGAVVYGNDFKFDNFP
VVGEKPDYKALKRIGKQGVIAMVSESTRVDFEGKTASEGVAANLLKNDLLGTDNEDNAVV
VTTFSSHIARIKSITDIASKMGRIPVLVGRSMSKYCGIAQDIGLVKFPKETKICWDPSSI
DKTFHQIMKDGKENYLMVVTGHQGEEGAVLSRMATNKTPFRFEKYDQVVFSADVIPNPMN
AAQRYLLEARLNLAGVRLFKGAHVSGHAAKEDHRDILRWLQPEHLIPAHGDFNLTSAYAK
LAEEEGFRLGEDVHLLRNGQSLKFERVI
NT seq 1347 nt   +upstreamnt  +downstreamnt
ttgcagttagaagtagtcgcaataggtggatacgaagaagtcggaaggaacatgactgcc
gtaaatatcgacggcgagatcataattttcgatatgggtgtaagactcgacaggataatg
attcacgaggatacggacatctcaaaaatgcacagtttaaatttaattgagatgggcgta
attccagatgatacggtaatgaaaaatatcgaaggagaggttaaggcgattgttttaacg
cacgggcacctcgaccacatcggagcaattacaaaacttgcacacaggtacaacgctcca
attatcggaactccatacactttagaactcgtaaaaagagaaattttaagcgaaaagaaa
tttgatgttagaaatccattaattactttagaaaacggaaataaattagatttaacagca
aatattactttagaatttgtaaaaattacacacagtattcctgatgctgcaatggcagta
cttcacacacctcatggtgcagtagtttatggaaacgactttaaatttgataatttccct
gtagttggcgaaaaaccagattacaaagcgttaaaaagaattggaaaacagggcgtaatt
gcaatggtttccgaaagtacaagagttgattttgaaggaaaaacagcatcagaaggagtt
gctgcaaaccttttgaaaaacgaccttttaggaactgacaatgaagacaatgcagtagta
gtaactacattttcatcacacattgcaagaattaaatccattactgatattgcttcaaaa
atgggtagaattccagtacttgttggaagatccatgtcaaaatactgtggaattgcacaa
gatatcggtttagtaaaattcccaaaagaaacaaaaatttgttgggacccttcatcaatc
gataaaaccttccaccagataatgaaagacggtaaagaaaactaccttatggttgttaca
ggacaccaaggagaagaaggtgcggttttatccagaatggcaacaaataaaactccattt
aggtttgaaaaatacgatcaggttgtattttcagcagacgttattccaaacccaatgaat
gcggcacaaagatatttattggaagcaagattaaatttagcaggagttaggctatttaaa
ggagctcacgtatctggacacgcagcaaaagaagatcacagggacatattaagatggtta
caaccagaacacttgatacctgctcacggtgattttaatttaacttcagcatatgctaaa
ttagcagaagaagaaggattcagactcggtgaagatgtacacttactcagaaacggtcaa
agcttgaaatttgaaagagtaatttaa

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