Methanococcus maripaludis KA1: MMKA1_13110
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Entry
MMKA1_13110 CDS
T03692
Symbol
endA
Name
(GenBank) tRNA-splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mmak
Methanococcus maripaludis KA1
Brite
KEGG Orthology (KO) [BR:
mmak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmak03016
]
MMKA1_13110 (endA)
Enzymes [BR:
mmak01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MMKA1_13110 (endA)
Transfer RNA biogenesis [BR:
mmak03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MMKA1_13110 (endA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
Motif
Other DBs
NCBI-ProteinID:
BAP61428
UniProt:
A0A2Z5PHQ5
LinkDB
All DBs
Position
1277700..1278233
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AA seq
177 aa
AA seq
DB search
MMAKPKKTIPAKLSDERIVIYDKDGISRLNEKRYGELHENFLSLSFVEGLYLVSKNWISL
RDKNKKLLSFEELFDVAQNIDRKLCIRYLAYKDLRNRGYTVRTGLKYGSDFRLYERSNID
EIHSRYLVKVFSEEIPCEISEITGFVRVAHSVRKELIIAIVDADGSVVYYNMGYLKL
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgaaacctaaaaaaacgataccggcaaaactctcggatgagagaattgtaatt
tacgataaagatggaatatctcgtttaaacgaaaaaagatacggagaacttcacgaaaac
tttctttcactttcatttgtggaagggctctaccttgtatcaaaaaactggatatccttg
agagataaaaataaaaaactgctctcttttgaagaattattcgatgttgcacagaatatc
gatagaaaattatgcattcgatatttagcttataaagacctcagaaatcgtggatataca
gttcgaactggtttaaaatacggttctgattttaggctttacgaaagaagtaatattgat
gagattcactcgagataccttgtaaaagttttttcagaagaaattccttgcgaaatttca
gaaattacaggatttgttagagttgcacactccgttagaaaagaattgattattgcaata
gttgatgctgatggaagcgtcgtttattacaacatgggatatttaaagctttaa
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