KEGG   Methanococcus maripaludis KA1: MMKA1_15360
Entry
MMKA1_15360       CDS       T03692                                 
Symbol
fen
Name
(GenBank) flap endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mmak  Methanococcus maripaludis KA1
Pathway
mmak03030  DNA replication
mmak03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mmak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MMKA1_15360 (fen)
   03410 Base excision repair
    MMKA1_15360 (fen)
   03450 Non-homologous end-joining
    MMKA1_15360 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmak03032]
    MMKA1_15360 (fen)
   03400 DNA repair and recombination proteins [BR:mmak03400]
    MMKA1_15360 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmak04147]
    MMKA1_15360 (fen)
DNA replication proteins [BR:mmak03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MMKA1_15360 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MMKA1_15360 (fen)
DNA repair and recombination proteins [BR:mmak03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MMKA1_15360 (fen)
Exosome [BR:mmak04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MMKA1_15360 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc
Other DBs
NCBI-ProteinID: BAP61653
UniProt: A0A2Z5PGM5
LinkDB
Position
complement(1478225..1479199)
AA seq 324 aa
MGVQFGDLIPKTEISLKFLRNKTVAIDAMNVIYQFLSSIRLRDGSPLKNKNGDITSTYNG
IFYKTIYMLENGMTPIWVFDGKSHELKEKTKEERRKSREGALDSYMEAKEQNNLEEMQKY
AKRANFLDRKTVDNSKKLLELMGIPYVNAPSEGEAQCAELVKANNAFCVISQDYDSILYG
ADYVVKNITSSNKDIELIELEKTLSGLNISCDQLIDAAILIGTDYNPGGLKGFGPKKAID
TVKKGKMENYISEIENYSEIRKIFDEPNVTTDYDITLKTPKKDELAEFLIEENDFSKDRI
LPNIEKISNLLGNKKSQKSLEAWF
NT seq 975 nt   +upstreamnt  +downstreamnt
atgggagttcaattcggagatttgatacccaaaacagaaatctctttaaaatttttgaga
aataaaactgttgcaatcgatgcaatgaacgtaatttaccagtttttatcgagtattcgg
cttagggatggaagtcctttaaaaaataaaaatggggatattacttcaacttacaacggt
attttttataaaacaatttacatgttagaaaatgggatgacccctatatgggtttttgat
ggtaaatctcatgaattaaaagaaaaaacaaaagaagaacgaagaaaatctcgagaaggc
gctcttgatagttacatggaagcaaaagagcaaaataatttggaagaaatgcaaaaatac
gctaaaagagcaaattttttggatagaaaaacagtagataactccaaaaagctccttgaa
ttgatgggaattccatatgtaaatgccccttcagaaggagaagctcagtgtgcagaactt
gtaaaagcaaacaatgcgttttgtgttataagtcaggattacgattcaattctttatggt
gcagattacgttgtaaaaaacataacttcatcaaataaagacattgaattgatcgaactt
gaaaaaactctttctggattgaatatttcttgtgatcagttaattgatgctgcaatattg
attggaacggattacaatcccggcggtttgaaaggatttggtccgaaaaaagcgatcgat
actgttaaaaaaggtaaaatggaaaattacatttcagaaattgaaaattattctgaaatt
agaaaaatatttgatgaaccgaatgtaacaacagattacgacataactttaaaaacccct
aaaaaagatgagttagcagagtttttgatcgaagaaaatgatttttcaaaagataggatt
cttccaaacattgaaaaaattagcaaccttttgggcaataaaaaatcccaaaaaagtctt
gaagcctggttttag

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