Methanococcus maripaludis KA1: MMKA1_15640
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Entry
MMKA1_15640 CDS
T03692
Symbol
rad50
Name
(GenBank) DNA double-strand break repair rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mmak
Methanococcus maripaludis KA1
Brite
KEGG Orthology (KO) [BR:
mmak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmak03400
]
MMKA1_15640 (rad50)
DNA repair and recombination proteins [BR:
mmak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MMKA1_15640 (rad50)
Archaeal homologous recombinant proteins
MMKA1_15640 (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_29
SbcC_Walker_B
AAA_21
Rad50_zn_hook
AAA_27
ABC_tran
SMC_N
MukB
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAP61681
UniProt:
A0A2Z5PU64
LinkDB
All DBs
Position
1501817..1504798
Genome browser
AA seq
993 aa
AA seq
DB search
MIIKNIKMENFRSHRNTSINFNKGITSIIGQNGSGKSSIFQAMNFALFAPRGNNFRIENL
MQQGSASFSVELEFEMMGNSYLVKRKRFQNKTDDKLYVNGKLNAESASEINKKMEEILEI
DNSVFSNAIYIKQGEIANLIQMTPRDRKEVIGKLLGIEKYEKASEKMNIVKKSYEEMLFK
LEGELIQEPEILENLEKLKNEVSESEILKEEILKKYENLEKLKLEKNSELIQMEEKFAEN
NHLKENLKDVISEIKNIHLEIQNFKNSLSLVVEESKTLSENEENYKKYLELELNIKELNN
KLISHKSDYESYNKLKTIEESLIKELNNLEESLKDNKKNPDELKENLKENDEKILILDKI
KEKIKELEFIEKQIYEIKIHKKTVETLFDSVKIYDDSIKTFEELKTKKNSYENLLKEKFD
LEKKLQNETDEKTKLISELTDLKKIEEKINLENKFKEKYEDLSEKIDKLNEIVLKKESKI
SETKNSKAELEKTKDSCHVCRSKISEEKKQELLEKYNSEIENEKLSTESLKKQLEIILNK
KEQIKVKLNEIDSFKLKYGELKEKKNYSLKVEESIIETTGKLNELAEKISEYSSLNDEIS
LIENKLKDLENDYKNYNYSSQFLTKNDESEFLNKKLELSKIIGDYDSSKIENEKKSLENL
KDELKNIIYNLEREINLKTELKNIQNDISSKIGIVECYVKWEAEKSDFENKLSECKENYE
KYMESLAVLKNYSKTYSVEINNLNEFLNQKIAEKQQFCEKLLETRLKIEKNIQTVNYNPE
LHENAKRLYENILNEFNDILRTLERITSELKLKNENIIYLNKKIQNLANKKEERKKIEEF
KEYLDKIKREIFSKDGFQKYLREKYIPLIQRHTNQIFQEFELPYSHIQLKDDYSLIVDGL
PVETLSGGEQIAVSLALRLGISKAVCNNIECIILDEPTAYLDEDRRKNLLNIFKNIKTIN
QMAIITHHQELEQIADNIVKVRKIGENSKVSLE
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgattattaaaaatatcaaaatggaaaacttcagaagccacagaaacacctcgataaat
tttaacaaaggaataacttcgataatcgggcaaaatggaagtggaaagtcgtcaattttt
caagcaatgaattttgcactttttgctccgcgtggaaacaattttaggattgaaaattta
atgcaacagggctctgcatctttttctgtagaattagaatttgaaatgatgggaaatagt
taccttgtaaaaagaaaaaggtttcaaaataaaacagatgacaaattatacgttaacgga
aaattaaatgcggaatctgcatctgaaatcaacaaaaaaatggaagaaatattagaaatt
gataacagcgtattttcaaatgcaatatacataaaacagggcgaaattgcaaatttaatt
cagatgactccaagagatagaaaagaggttattggaaagcttcttggaattgaaaaatat
gaaaaagcctctgaaaaaatgaatattgtaaaaaaaagctatgaagaaatgctttttaaa
cttgaaggagaactaatccaagaacctgaaattttagaaaatcttgaaaaattaaaaaat
gaagtttctgaatctgaaattttaaaagaagaaatcttaaaaaaatatgaaaatttagaa
aaactaaaacttgaaaaaaattcagaattaattcaaatggaagaaaaatttgctgaaaat
aaccacttaaaagaaaatttaaaagatgttatttctgaaattaaaaatatacatttagaa
attcaaaatttcaaaaattcactaagtttagttgttgaagaatcaaaaaccttatctgaa
aatgaagaaaattacaaaaaatatttagaacttgaattaaacattaaagaattgaataat
aagttaataagccacaaatcagactacgaatcatataataaactaaaaacgattgaagaa
tcgttaataaaagaattaaataacttagaagaatctttaaaagataataaaaaaaatcct
gatgaattgaaagaaaatttaaaagaaaatgatgaaaaaattctaattttagataaaata
aaagaaaaaatcaaagaattagagtttattgaaaaacagatttatgaaataaaaatccac
aaaaaaacagtggaaactctttttgatagtgttaaaatttacgatgactcgattaaaact
tttgaagaactaaaaactaaaaaaaatagttatgaaaatcttttaaaagaaaaatttgac
cttgaaaaaaaacttcaaaacgaaactgacgaaaaaacaaaattaatttctgaattaact
gatttaaaaaaaatagaagaaaaaataaatcttgaaaataaatttaaagaaaaatatgaa
gatttatctgaaaaaatagataaattaaatgaaatcgttttgaaaaaagaaagtaaaatt
tcagaaactaaaaattctaaagcagagcttgaaaaaaccaaagattcatgtcacgtttgt
cggtccaaaataagtgaagaaaaaaagcaggaattgcttgaaaaatataattctgaaatt
gaaaatgaaaaattatcaactgaaagtcttaaaaaacagcttgaaatcatattaaacaaa
aaagagcagatcaaagttaaattaaatgaaattgattctttcaaattaaaatacggggaa
ttaaaagaaaaaaagaattattctttaaaagttgaagaatcgataatcgaaactactgga
aaattaaacgaattagctgaaaaaattagcgaatattcttcattgaatgacgaaataagt
ttaattgaaaataaattaaaagatttagaaaatgattataaaaattacaattattcctcc
caatttttaactaaaaatgacgaatctgaatttttaaataaaaaattggaactttcaaaa
attattggagattacgattcttcaaaaattgaaaatgaaaaaaaatcccttgaaaattta
aaagatgaattaaaaaacatcatttacaatttagaaagagaaattaacttaaaaacggaa
ttaaaaaatattcaaaacgatatttcttcaaaaataggtattgttgaatgttacgttaaa
tgggaagctgaaaaatcagactttgaaaacaaattatcagaatgtaaagaaaattatgaa
aaatatatggaaagtctggcagttcttaaaaactattcaaaaacgtattctgttgaaata
aataatttaaacgagtttttaaaccaaaaaattgctgaaaaacagcagttttgtgaaaaa
ctccttgaaacacgactaaaaattgaaaaaaatattcagactgtaaactacaatccagaa
ttgcatgaaaacgctaaaagactttatgaaaatatattaaatgaatttaacgacatttta
agaactttagagagaataacttccgaattaaaacttaaaaatgagaatataatttattta
aataaaaaaattcaaaatctggcaaataaaaaagaagaaagaaaaaaaattgaagaattt
aaggaatatctcgataaaataaaaagagaaatcttttcaaaagatggtttccagaaatat
ttaagagaaaaatatattccattaattcaaaggcacacaaaccagatttttcaggaattt
gaacttccatattcccatattcaactaaaagatgattacagcttgatagttgacggcctt
cctgttgaaacattaagcggtggagaacagattgcagtttcacttgcattaagacttgga
atttctaaagcagtttgtaataatatagaatgcattattttggatgaaccaacagcgtat
cttgacgaagataggcgtaaaaaccttttaaatatctttaaaaatataaaaacaataaac
cagatggcaataattacacatcatcaagaactcgaacagattgcagataacattgtaaaa
gttagaaaaatcggcgaaaattcaaaagtatctttagaatag
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