Mycobacterium marseillense: CKJ54_04270
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Entry
CKJ54_04270 CDS
T05049
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mmal
Mycobacterium marseillense
Pathway
mmal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CKJ54_04270
09124 Replication and repair
03420 Nucleotide excision repair
CKJ54_04270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmal03021
]
CKJ54_04270
03400 DNA repair and recombination proteins [BR:
mmal03400
]
CKJ54_04270
Enzymes [BR:
mmal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKJ54_04270
Transcription machinery [BR:
mmal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CKJ54_04270
DNA repair and recombination proteins [BR:
mmal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CKJ54_04270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Cox20
Motif
Other DBs
NCBI-ProteinID:
ASW89206
UniProt:
A0AAC9VNM1
LinkDB
All DBs
Position
complement(835834..837483)
Genome browser
AA seq
549 aa
AA seq
DB search
MSDGPLIVQSDKTVLLEVDHEQAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKSPAHGLTLVSLDRAVLEEVL
RNKKIAPMLGARIDDDTVIVHPSERGRVKQMLLKIGWPAEDLAGYVDGEAHPISLAQDGW
HLRDYQQMATDSFWSGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRE
LIARTSLTEEEIGEYSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSKRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECVEVRVTMTDNERMMYATAEPEERYKLCSTVHTKIAVVKSILAKHPGEQTLVIGAYLD
QLDELGAELGAPVIQGSTRTKEREELFDGFRRGEVNTLVVSKVANFSIDLPEAAVAVQVS
GTFGSRQEEAQRLGRLLRPKADGGGAVFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacggaccgttgatcgtgcagtccgacaagacggtgctgctcgaagtggaccac
gaacaagccggcgccgcgcgagccgccatcgcgccgttcgccgagctcgaacgtgcaccc
gagcacgtgcacacctaccgcatcacaccgctggcgctgtggaacgcccgcgccgccgga
cacgacgccgaacaggtcgtcgacgcgctggtctccttttcccgctacgcggtaccgcag
ccgctgctggtcgacatcgtcgacaccatggctcgctacggccgcctgcagctggtgaaa
agccccgcccacggcctgacgctggtgagcctggaccgcgcggtgctcgaggaagtgctg
cgcaacaagaagatcgccccgatgctcggcgcccgcatcgacgacgacacggtcatcgtc
caccccagcgagcgcggtcgggtcaagcagatgctgctcaagatcggttggcccgccgag
gatctggcgggatacgtcgacggcgaggcacacccgatcagcctggcccaggacggctgg
cacttgcgcgactaccagcagatggccaccgactcgttctggtccggtggctccggtgtg
gtagtgcttccctgcggcgccggtaagacgttggtgggggccgccgcaatggcgaaagcc
ggtgcgacgacgctgattttggtcaccaacatcgtcgcggcgcggcagtggaagcgcgag
ctgatcgcccgcacctcgctcaccgaggaggagatcggcgagtattcgggcgagcgcaag
gagattcggcccgtcaccatctcgacgtaccagatgatcacccgccgcaccaagggcgag
taccgccacctcgaactcttcgacagccgcgactggggcctgatcatctacgacgaggtc
cacttgttgccggcgccggtgttccggatgaccgccgacctgcaatccaagcggcgcctg
gggttgaccgccacactggtgcgcgaggacggccgcgagggcgacgtgttctccttgatc
ggcccgaaacgctatgacgcgccatggaaggacatcgaggcgcagggctggatcgcgccg
gcggagtgtgtcgaggtgcgggtcaccatgaccgacaacgagcggatgatgtacgccacc
gccgagcccgaagagcgttacaagctgtgctcgacggtgcacacgaaaattgctgtggtc
aaatcgattctggcgaagcatccgggtgagcagaccctggtgatcggtgcgtatctcgat
cagctcgacgagctgggcgccgaactgggcgccccggtgatccagggctccacgcggacc
aaggaacgcgaagagctgttcgacggcttccgccgcggcgaggtcaacacgctggtggtg
tccaaggtcgccaacttctctatcgacctgcccgaagccgcggtggccgtgcaggtttcg
ggtaccttcggctcccgccaagaagaggcgcaacgtctcggccggttgctgcggccgaag
gccgatggtggcggcgccgtcttctattccgtggtggcgcgcgacagcctggacgcggaa
tacgcggcgcaccggcaacgcttcctcgccgagcagggttatggctacatcattcgcgac
gccgacgacctcctgggcccggccatttaa
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