Mycobacterium marseillense: CKJ54_04670
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Entry
CKJ54_04670 CDS
T05049
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mmal
Mycobacterium marseillense
Pathway
mmal03420
Nucleotide excision repair
mmal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CKJ54_04670 (pcrA)
03430 Mismatch repair
CKJ54_04670 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmal03400
]
CKJ54_04670 (pcrA)
Enzymes [BR:
mmal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKJ54_04670 (pcrA)
DNA repair and recombination proteins [BR:
mmal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKJ54_04670 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CKJ54_04670 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ASW92811
UniProt:
A0AAD0E349
LinkDB
All DBs
Position
916810..919167
Genome browser
AA seq
785 aa
AA seq
DB search
MTSAFPGPHAPQSPHASEADQLLEGLNPQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRIA
YLIAARGVGVGQVLAITFTNKAAAEMRERVVRLVGNRARAMWVSTFHSTCVRILRNQASL
IEGLNSNFSIYDADDSRRLLQMIGRDMGLDIKRYSPRLLANAISNLKNELIDPADAVSKL
TDDSDELSRTVASVYGEYQRRLRTANALDFDDLIGETVAVLRAFPQIAQHYRRRFRHVLV
DEYQDTNHAQYVLVRELVGRGGSEAPESSDDVPPAELCVVGDADQSIYAFRGATIRNIED
FERDYPDATTILLEQNYRSTQNILSAANSVIARNSGRRDKRLWTAEGAGELIVGYVADNE
HDEARFVAEEIDALADKGEITYNDVAVFYRTNNSSRSLEEVFIRAGIPYKVVGGVRFYER
KEIRDIVAYLRVLDNPGDAVSMRRILNTPRRGIGDRAEACVAVYAENTGAGFADALVAAA
EGKVPMLNSRAEKAIAGFVELLDELRGRLDDDLGDLVESVLERTGYRRELESSTDPQELA
RLDNLNELVSVAHEFSTDRANAEALDESLQTPDDEDVPDTGVLAEFLERVSLVSDTDEIP
EDGAGMVTLMTLHTAKGLEFPVVFVTGWEDGMFPHMRSLDDPTELSEERRLAYVGITRAR
QRLYVSRAIVRSSWGQPMLNPESRFLREIPQELIEWRRTAPTPSFSAPVSGAGRFGTPRA
APTRSGMSKRPLLVLEPGDRVTHDKYGLGRVEEVSGVGESAMSLIDFGSSGRVKLMHNHA
PISKL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
gtgacgagcgcgtttcctggcccgcacgcccctcaatccccgcatgcctccgaagccgac
caactcctcgaagggctcaacccgcaacagcgccaggcggtggtgcacgagggttccccg
ttgctgatcgtcgcgggggcgggatccggcaagaccgcggtgttgacgcgccgcatcgcc
tatctgatcgcggcgcgcggggtcggagtcggccaggtgctggccatcacgttcaccaac
aaggccgcggccgagatgcgggaacgggtcgtgcggctggtcggtaaccgggcccgcgcc
atgtgggtctccacgtttcactcgacctgcgtacgcatcctgcgcaaccaggcgtccctg
atcgaaggcctcaattccaacttctcgatctacgacgccgacgattcgcggcggctgttg
cagatgatcgggcgcgatatggggctcgacatcaagcgctactcgccgcggctgctggcc
aacgccatctccaacctgaagaacgagctgatcgacccggccgacgcggtctccaagctg
accgacgattccgacgagttgtcccgcacggtggccagcgtctacggcgagtaccagcgg
cggctgcggacggcgaacgcgctggacttcgacgacctgatcggggagaccgtggcggtg
ctgcgggccttcccgcagatcgcccagcactatcgccggcggttccgtcatgtgctcgtc
gacgagtaccaggacaccaaccacgcccagtacgtgctggtgcgggaattggtcggccgc
ggcggttcagaagcaccggaatcgtccgacgacgtgccgcccgcggagttgtgcgtggtc
ggcgatgccgaccaatcgatctatgcgttccgcggcgccaccatccgcaacatcgaggac
ttcgaacgcgactatccggacgcgacgaccattctgctggaacagaattaccgctcgacg
cagaacattctgtcggcggccaactcggtcatcgcccgcaattccgggcgccgcgacaag
cgcctatggaccgccgaaggcgccggcgagttgatcgtcggctacgtcgccgacaacgag
catgacgaggcccgcttcgtcgccgaggagatcgacgcgctcgccgacaagggcgagatc
acctacaacgacgtcgccgtcttctatcgaaccaacaactcgtcgcgatcgttggaagag
gtcttcatccgcgccggaatcccctacaaagtcgttgggggagtgcgcttttacgagcgc
aaggagattcgcgacatcgtcgcctatctgcgggtgctggacaaccccggggacgcggtc
agcatgcggcgcatcctcaataccccgcgtcgcggcatcggggatcgcgcggaggcctgc
gtcgcggtgtacgccgagaacaccggggccggcttcgccgacgcgctcgtcgccgcggcc
gaaggcaaagtgccgatgctgaattcccgcgcggagaaggcgatcgcgggcttcgtcgag
ctgctcgacgagctacggggccgcctggatgacgatctcggtgatctggtcgagtcggtg
ctcgaacgcaccgggtaccgcagggagctggaatcctccaccgatccccaggaactggcg
cggctggacaacctcaacgaactcgtcagtgtggcacacgaattcagcaccgaccgcgcg
aatgccgaagcgttggatgagtcgctgcagacgcccgacgacgaggacgtgccggatacg
ggtgtgctggcggagttcttggaaagggtgtcgctggtttccgacaccgacgagattccc
gaggatggcgccggcatggtcacgctgatgaccctgcacaccgcgaaaggccttgagttt
ccggtggtgttcgtcaccgggtgggaggacgggatgttcccccacatgcggtcattggac
gacccgaccgaactctctgaggagcggcgactggcatacgtgggcatcacccgcgcccgg
cagcgactgtacgtgagcagggccatcgtccggtcctcctggggacagcccatgctcaac
ccggaatcccgtttcctcagggagattccgcaagaactgatcgaatggcgccgcaccgcg
ccgaccccgtcgttcagcgcgccggtgagtggtgccggacgattcggcacgccgcgcgcg
gcgcccactcgttccgggatgagtaaacgtccgctcctggtgctcgagcccggtgaccgg
gttacgcacgacaagtacggcctgggccgggtcgaggaagtgtccggcgtcggcgaatcg
gcgatgtcgctgatcgacttcggcagctcgggacgggtcaagctgatgcacaaccacgcc
ccgatcagcaagctctag
DBGET
integrated database retrieval system
