Mycobacterium marseillense: CKJ54_12705
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Entry
CKJ54_12705 CDS
T05049
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
mmal
Mycobacterium marseillense
Brite
KEGG Orthology (KO) [BR:
mmal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmal03021
]
CKJ54_12705
Transcription machinery [BR:
mmal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CKJ54_12705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_3
HTH_23
Sigma70_ECF
HTH_Crp_2
DUF134
MarR
MarR_2
HTH_24
GerE
DUF7343
KORA
DUF1492
LacI
Trp_repressor
HTH_Tnp_ISL3
HTH_7
HTH_26
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ASW90640
UniProt:
A0AAC9YKY3
LinkDB
All DBs
Position
2700828..2701637
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AA seq
269 aa
AA seq
DB search
MTNTIAPTPPAPAPARQSDDSYDDVVEMFLALHQMPAESHEYAHQRERIVARCLPLADHV
ASHFARRGEGLDDLIQVARLGLMNAVNRFDPAKGPSFIGFAVPTMMGEVRRYFRDYSWGM
RVPRRLRELHVQISRATADLAQQLGRAPNAGELSQMLEVPREEIVECLVAGDAYRLDSLD
APLGADSSGTPRSVADSVGDIDPQIEHITNREALRVLVATLPPREREVLRMRFFESMTQS
QIAERIGVSQMQVSRILANTLRSLRDQLE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacacgattgcccctacccctccggctccggcccccgccagacaatccgacgat
tcatacgacgatgtggtcgagatgttcttggcgctgcatcagatgccggccgaatcgcac
gagtacgcccaccagcgggaacgcatcgtggcccgatgcctaccgctggccgaccacgtg
gccagccacttcgcccgccggggcgaaggtctcgacgacttgattcaggtcgcgcgcctg
ggcttgatgaacgccgtcaaccggttcgaccccgcgaagggtccgagcttcatcgggttc
gccgtcccgaccatgatgggcgaggtccggcgttacttccgcgactacagctgggggatg
cgcgtccctcggcggttgcgtgaattgcacgttcaaatcagcagggccacagccgatctc
gcccagcaactcggccgggcgccgaacgccggcgaactatcgcagatgctcgaggtgccg
cgcgaggagatcgtcgaatgcctcgttgcgggcgacgcctaccggctcgattccctggac
gcgccgctgggcgccgacagttccggcacgccgcgttcggtggccgattcggtgggcgac
atcgatccgcagatcgagcacatcaccaaccgggaagcgctgcgcgtcctcgttgccacc
ctgccgccgcgcgaacgcgaggtgttgcgcatgcggttcttcgaatcgatgacgcagagc
cagatcgcggagcggatcggcgtatcgcagatgcaggtctcacgcatcctggcaaacacg
ctgcgctccttgcgcgaccaactcgagtag
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