Mycobacterium marseillense: CKJ54_13690
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Entry
CKJ54_13690 CDS
T05049
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mmal
Mycobacterium marseillense
Pathway
mmal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CKJ54_13690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmal03400
]
CKJ54_13690
Enzymes [BR:
mmal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CKJ54_13690
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CKJ54_13690
DNA repair and recombination proteins [BR:
mmal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CKJ54_13690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Auto_anti-p27
MHC_II_alpha
Zn_ribbon_TFIIB
DZR_2
Zn_ribbon_8
Zn_ribbon_NUD
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
ASW90805
UniProt:
A0AAC9YL44
LinkDB
All DBs
Position
2963425..2964210
Genome browser
AA seq
261 aa
AA seq
DB search
MPELPDVEGYRRQLAATLPRRRIRGVRVHDPGILRNTTASTLARRLTGHRFSGPRRHGKW
LVLPTDGPALLIHSGMTGRPYYAADGATHDPYERLLVTLDEGELRYADLRKLRGVWLADD
ADDIGHITGPQGPDALGLDLREFRALLASRSTRSRQLKPTLMDQSVIAGLGNLLVDEICW
RARIRPTMAVAELGDDDVKALHAAMTRVLRTAVRHGRVPGLPRWLTRARDEPDPRCPRCG
TPLERARVGGRATLWCPRCQP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactgcccgacgtggaagggtaccggcggcaactggccgccaccctgccgcgg
cggcgaatccggggcgtgcgggtgcacgatcccgggatcctgcgcaacaccaccgcgtca
acgctcgcgcgccggctgaccggtcaccgcttctccggcccacgccggcacggcaagtgg
ctggtgctgcccacggacggcccggcgctgctgatccacagcggcatgaccggccgcccc
tactacgccgccgacggggccacccacgacccctacgagcggctgctggtgacgctggac
gagggtgagctgcgctacgccgacctccgcaagttacgcggggtgtggctggccgacgat
gccgacgacatcgggcacatcaccggcccgcagggccccgacgcgttgggcctggacctg
cgcgaattccgagcgctgctggcctcgcggtccacccggtcgcggcagctcaaacccacg
ctgatggaccagtcggtgatcgccggcctcggcaacctgctggtcgatgaaatctgctgg
cgggccagaatccggcccaccatggcggtcgcggaactaggtgacgacgacgtgaaggcc
ctgcacgccgcgatgacgcgggtgctgcgcacggcggtgcgacacggccgggtgccgggc
ttgccgcgctggctcacccgggcgcgcgacgagcccgacccccgctgcccgcgctgcggc
acgccgctcgagcgtgcccgggtgggcggccgggcgacgctgtggtgcccgcgctgtcag
ccctag
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