Mycobacterium marseillense: CKJ54_17135
Help
Entry
CKJ54_17135 CDS
T05049
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mmal
Mycobacterium marseillense
Pathway
mmal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CKJ54_17135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmal03400
]
CKJ54_17135
Enzymes [BR:
mmal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CKJ54_17135
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CKJ54_17135
DNA repair and recombination proteins [BR:
mmal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CKJ54_17135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
TackOD1
HU-HIG
DUF5830
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ASW91404
UniProt:
A0AAC9YLT7
LinkDB
All DBs
Position
complement(3704184..3705032)
Genome browser
AA seq
282 aa
AA seq
DB search
MPELPEVEVVRRGLHAHVVGKTITAVRVHHPRAVRRHEAGPADLAARLLNDRITGTDRRG
KYLWLLLDSDAALVVHLGMSGQMLLGTVPRADHVRISALLDDGTVLSFADQRTFGGWMLA
DLVEVDGSVVPEPVAHLARDPLDPRFDADAVVKVLRRKHSEIKRQLLDQQVVSGIGNIYA
DEALWRAKVHGARIADTLTRKQLTAVLDAASDVMREALAKGGTSFDSLYVNVNGESGYFD
RSLDAYGREGESCRRCGAVMRREKFMNRSSFYCPKCQPRPRG
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcgaggtggtgcgccgcggcctgcacgcccatgtcgtgggc
aagacgatcacggccgtccgggtgcatcacccccgcgcggtgcgccgccacgaggcgggg
cccgcggacctcgccgcccggctcctcaacgaccgcatcaccggcactgaccggcgcggc
aaatacctgtggctgctgctcgacagcgacgcggcgctcgtcgttcacctcggcatgagc
gggcagatgctgctcggtacggtgccgcgcgcggaccacgtgcggatctccgcgctgctc
gacgacgggaccgtgctgagcttcgccgaccaacgcaccttcggcgggtggatgctcgcc
gacctggtcgaggtggacggcagcgtggtccccgagcccgtcgcacacctggcgcgcgac
ccgctggatccccgattcgatgccgacgcggtcgtaaaagtgttgcggcgcaagcactcc
gaaatcaagcgccagctgctcgaccagcaggtcgtgtcgggcatcggcaacatctacgcc
gacgaggcgctgtggcgggccaaggtgcacggggcacggatcgccgacaccctgacccgc
aagcagttgaccgccgtgctggacgcggcgtccgacgtgatgcgtgaggcgctggccaag
ggcgggacttcgtttgattcgctgtacgtcaacgtcaacggcgaatccggatacttcgac
cgttcactggacgcctacggccgcgaaggcgagagctgccgccgctgcggcgcggtgatg
cgcagggagaagttcatgaaccgctcgtcgttctattgccccaaatgccaaccgcgcccg
cgtggttga
DBGET
integrated database retrieval system
