Mycobacterium marseillense: CKJ54_19680
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Entry
CKJ54_19680 CDS
T05049
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mmal
Mycobacterium marseillense
Brite
KEGG Orthology (KO) [BR:
mmal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmal03021
]
CKJ54_19680
Transcription machinery [BR:
mmal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CKJ54_19680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_24
HTH_3
MarR
Sigma70_ECF
MarR_2
DUF7343
HTH_IclR
KORA
DksA-like_N
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ASW91841
UniProt:
A0AAC9YM81
LinkDB
All DBs
Position
complement(4230469..4231257)
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AA seq
262 aa
AA seq
DB search
MTPRAAGGSVSRPNEYADVPDMFRELASVAPDSMEVQRQRDKIVERCLPLADHIARRFEG
RGEPRDDLVQVARVGLVNAVVRFDVDAGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRL
KELHLRLGTATADLSQRLGRAPTATELAAELEMDREEVVEGLVAGSSYNTLSIDSGGGGE
EEEARAIADTLGDVDTGLDRIEDQESLRPLLEALPERERTVLVLRFFESMTQTQIAERVG
ISQMHVSRLLAKSLTRLRDQLQ
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgacaccgcgagctgccggcggttctgtctcgcgtccgaacgaatacgccgatgttccg
gacatgttccgggagttggcttccgtggcgcccgactccatggaagttcagcgccaacga
gacaagatcgtcgagcgctgcctgccgctggccgaccacatcgcgcgccgcttcgagggc
cgcggcgagccacgcgacgacctcgtccaggtggcccgcgtcgggttggtcaacgcggtg
gtgcggttcgacgtcgacgccggctccgacttcgtttcgttcgcggtgcccacgatcatg
ggcgaggtccgccgccacttccgcgacaacagctggtcggtcaaggtgccgcggcgcctc
aaggaactacacctgcggctcggcaccgccaccgccgatctgtcgcagcggctgggtcgc
gcgcccaccgcgaccgaactggccgccgagctcgagatggaccgcgaagaggtcgtcgag
ggcctggtcgccggcagctcctacaacaccttgtcgatcgacagcggcggcgggggcgag
gaagaggaagcgcgcgcgatcgccgacaccctcggcgacgtggacaccggcctggaccgc
atcgaagaccaggaatcgctacgcccgttgctcgaggcgctgcccgagcgggaacgaacg
gtgttggtactgcggttcttcgagtcgatgacgcaaacgcagatcgccgagcgggtcggc
atctcacagatgcacgtatcgcgcctactggcgaaatcgctaacgcggctgcgggaccag
ttgcagtag
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