Mycobacterium marseillense: CKJ54_20445
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Entry
CKJ54_20445 CDS
T05049
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mmal
Mycobacterium marseillense
Pathway
mmal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CKJ54_20445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmal03021
]
CKJ54_20445
03400 DNA repair and recombination proteins [BR:
mmal03400
]
CKJ54_20445
Enzymes [BR:
mmal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CKJ54_20445
Transcription machinery [BR:
mmal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CKJ54_20445
DNA repair and recombination proteins [BR:
mmal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CKJ54_20445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ASW91978
UniProt:
A0AAC9YMF8
LinkDB
All DBs
Position
complement(4389589..4390632)
Genome browser
AA seq
347 aa
AA seq
DB search
MLISQRPTLSEEVLTDNRSQFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTAIILNLKSLVVSSEEDEPVTMYLRKQGPGEVTAGDIVPPAGVTVHN
PDLHIATLNDKGKLEVELVVERGRGYVPAVQNRASGAEIGRIPVDSIYSPVLKVTYKVDA
TRVEQRTDFDKLILDVETKSSINPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVSRTESDLLDIRNFGQKSIDEVKVK
LHQLGLSLKDSPASFDPSQVAGYDVATGTWSTEAAYDDQDYAETEQL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctgatctctcagcgacccaccctgtcggaagaagtcctcaccgataaccgctcccag
ttcgtcatcgagccgctggagccgggattcggttacaccctgggcaattcgttgcgccgg
acgctgctgtcctcgattccgggcgcggccgtcaccagcatccgcatcgacggtgtgctg
cacgagttcaccaccgtgcccggcgtgaaagaagacgtcaccgcgatcatcttgaacctc
aagagcctggtcgtgtcctccgaggaggacgagccggtcacgatgtacctgcgcaagcag
ggcccgggcgaggtcaccgcgggtgacatcgttccccccgccggcgtcacggtgcacaac
cccgacctgcacatcgcgacgctgaacgacaagggcaagcttgaggtcgagctggtcgtc
gagcgtggccgtggctacgtgccggccgtgcagaaccgggcatctggcgccgagatcggc
cgcatcccagtcgattccatctactcgccggtgctcaaggtcacctacaaggtggacgcc
acccgtgtcgagcagcgcaccgacttcgacaagctgatcctcgacgtcgagaccaagagc
tcgatcaacccccgcgacgcgctggcgtcggcgggtaagacgctggtcgaattgttcggt
ctggcacgcgaactcaacgtcgaggccgagggcatcgagatcgggccgtcgccggcggag
gccgaccacatcgcgtcgttcgcgctgccgatcgacgacctggacctgacggtgcggtcc
tacaactgcctcaagcgcgagggtgtgcacaccgtcggcgagctggtgtcgcgcaccgag
tccgacctgctggacatccgcaacttcggtcagaagtccatcgacgaggtgaaggtcaag
ctgcaccagctgggtctgtcgctcaaggacagcccggcgagcttcgatccctcgcaggtc
gcgggctacgacgtcgccaccggcacctggtccaccgaggccgcctacgacgaccaggat
tacgcggaaaccgaacagctgtaa
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