Mycobacterium marseillense: CKJ54_21130
Help
Entry
CKJ54_21130 CDS
T05049
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mmal
Mycobacterium marseillense
Pathway
mmal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKJ54_21130 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmal03400
]
CKJ54_21130 (recD)
Enzymes [BR:
mmal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CKJ54_21130 (recD)
DNA repair and recombination proteins [BR:
mmal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CKJ54_21130 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
RecD_N
AAA_22
UvrD-helicase
Helicase_RecD
SH3_13
PhoH
nSTAND3
Mg_chelatase
AAA_28
AAA_16
AAA_29
NTPase_1
T2SSE
MukB
SRP54
SLFN-g3_helicase
TrwB_AAD_bind
AAA_24
AAA_5
cobW
Motif
Other DBs
NCBI-ProteinID:
ASW92100
UniProt:
A0AAC9YMQ2
LinkDB
All DBs
Position
4518925..4520646
Genome browser
AA seq
573 aa
AA seq
DB search
MTAGVAFATGLLRTFSDAGVFEAADIHVAQRLTTLTAESDERVALAVALVVRALRSGSVC
VDLRTAPAQVGEAVLPWPGADDWLAAVRASTLLGPPSVLRFFGDLLYFDRYWLEEEQVCT
DLLALSAPPIVVESSSYERLFEPGYEEQRAAAEIAVSQAVTVLTGGPGTGKTTTIARLLA
LLVEHTELAGLPPPRIALAAPTGKAAARLAEAVATGAQRLDAVDRARLAGLPGTTLHRLL
GPRPDTSVRFKHNRTNRLPHDVVVVDETSMVSLTMMARLAEAVRPDSRLILVGDPDQLAS
VEAGAVLADLVDGLADRDDVRVAALRTPHRYGTSIGALAAAIRDGDADRVVELLAAGGEH
IEWVDSGRPADRLREVLVAHALRLRSAALLGAADEALATLDEHRLLCAHREGPYGATHWN
TLVQKWIAEATGQPAWSQWYAGRPLLVTANDYGLRLYNGDTGVAVAGVDGLRAVIAGASG
PLDFATSRLGEVETMHAMTIHKSQGSQADEVTVLIPPEDSRLLTRELFYTAVTRAQTRVR
VVGPEASVRAAIERRAMRATGLRQRLRADAAAT
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgacggctggggtcgcgttcgcgaccggattgctgcgcaccttcagtgacgccggcgtc
ttcgaggccgcggatatccacgtggcgcaacgactcaccacgctcaccgctgagtccgac
gagcgggtggccctggcggtcgcgctggtcgtgcgcgcgctgcggagtggttcggtgtgc
gtcgatctccgcacggcacccgcgcaggtcggcgaggccgtcctgccgtggcccggcgcc
gacgactggctggcggcggtgcgggcgagcaccctgctcgggccgccatcggtgctgcgg
ttcttcggggatctgctgtacttcgaccggtactggctcgaggaggagcaggtgtgcacc
gacctgctcgccctgtcggctccgccgatcgtcgtcgaatcatccagctacgaaaggctt
ttcgagcccggatacgaagagcagcgcgcggccgccgaaatcgcggtatcgcaggcggtg
acggtgctgaccggcggccccggcaccggcaagaccaccacgatcgcgcggctgctcgcc
ctgctcgtcgagcacaccgagctggccgggctgccgccgccccggatcgccctggcggca
ccgaccggcaaggcggcggcgcggctggccgaggcggtggccacgggagcccagcggctc
gacgcggtggaccgggcccggctggccgggctgccgggcaccaccctgcaccggctgctg
ggtccgcggccggatacgtcggtgcggttcaagcacaatcgcaccaaccggctgccgcac
gacgtcgtcgtggtcgacgagacgtcgatggtgtcgttgaccatgatggcccgtctggcc
gaggcggtcaggccggactcccggctgattctggtcggcgacccggaccagttggcgtcg
gtggaggcgggcgccgtgctggccgacctggtggacggcctggccgaccgcgacgacgtg
cgggtcgccgccctgcgcaccccgcaccgatacggcacgtcgatcggcgcgctggccgcc
gcgatccgggacggcgacgcggaccgcgtggtggagttgctggcggccggcggggagcac
atcgaatgggtggactccgggcgcccggccgaccggctgcgcgaggtactcgtcgcgcac
gcgctgcggctgcggtcggcggcgctgctgggcgcggccgacgaggcgttggcgaccctg
gacgaacaccggctgctgtgcgcgcaccgcgagggtccgtacggggcgacgcactggaac
acgctggtgcagaagtggattgccgaagcgacggggcagcccgcctggtcgcagtggtac
gccgggcgtccgctgctggtgacggccaacgactacgggctgcggctctacaacggtgac
accggcgtggcggtggccggcgtggacgggctgcgagcggtcatcgccggcgcgagcgga
ccgctagacttcgcgaccagccgcctcggcgaggtggaaacgatgcacgccatgaccatc
cacaaaagtcagggcagccaggccgacgaggtgaccgtgttgataccgccggaggattcg
cgactgctgacgcgggagctgttctacacggccgtgacccgggcgcagaccagggtgcgg
gtggtcggtcccgaggcctcggtgcgcgcggcgatcgagcgacgggcgatgcgggccacc
ggattgcggcagcggctgcgggccgacgccgccgcgacgtga
DBGET
integrated database retrieval system
