Mycobacterium malmoense: K3U93_03950
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Entry
K3U93_03950 CDS
T07571
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mmam
Mycobacterium malmoense
Pathway
mmam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K3U93_03950 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmam03400
]
K3U93_03950 (recD)
Enzymes [BR:
mmam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K3U93_03950 (recD)
DNA repair and recombination proteins [BR:
mmam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K3U93_03950 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
Helicase_RecD
UvrD-helicase
RecD_N
PhoH
AAA_16
SH3_13
TraI_hel_assoc_N
nSTAND3
AAA_28
GFO_IDH_MocA_C3
Herpes_Helicase
TrwB_AAD_bind
NTPase_1
SRP54
DAP3
DEAD
SLFN-g3_helicase
AAA_29
Mg_chelatase
cobW
ATPase
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QZA18366
LinkDB
All DBs
Position
complement(843101..844825)
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AA seq
574 aa
AA seq
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MTADVEVSLTGVGLLRAFNEAGVLDVSDVHVAERVCALGEEPDERMALAVALAVRGLRGG
SVCVDLAAVSEVASAGDLPWPELEAWLVAVRASPLLGGLAVLHLYDDRLLYLDRYWLEET
QVRDDVLALLASGPAGELPASERLFPAEYGEQRQAAEIALSQAVTVLTGGPGTGKTTTVA
RLLALAAEQAESAGGPRPRVALAAPTGKAAARLQEAVTHEVAKLSAADRERLGELRAVTL
HRLLGPKPGTSARFRHDRGNRLPHNVIVVDETSMVSLTLMARLLEAVRPDARLVLVGDAD
QLASVEAGAVLADLVDGLSARDDVRVATLRTSHRFGKSIGALADAIRVGDADRALALLRS
GDEHIEYLESGDGDDSAPRLRSIVLPHALRLREAAALGAVDVALSTLDEHRLLCAHRRGP
FGVAHWNGLVQKWIAEETGQPAWSQWYAGRPLLVTANDYGLRVYNGDTGVTVAGAEGLRA
VIDTATGPLDFATSRLGDVETMHAMTIHKSQGSQADEVTVLLPQEDSRLLTRELFYTAVT
RAKTKVRVVGSEASVRAAVGRRALRATGLRQRLQ
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggatgtcgaggtctccctcaccggtgtcggcctgctgcgcgccttcaacgag
gccggcgtgctggacgtctccgatgtgcatgtggcggaacgtgtttgcgcgctgggcgag
gagcccgacgagcggatggcgctcgcggtggcgctggcggtgcgcgggctgcgcgggggg
tcggtgtgcgtggatctggctgcggtctcggaggttgcgagcgctggcgacctgccgtgg
ccggagcttgaggcgtggctggtggcggtgcgggcgagcccgttgctcggtgggctggcg
gtgctgcatctatatgacgatcggctgctttacctggaccggtattggctcgaggagacg
caggtgcgcgacgacgtgctggcgctgctggcgtccgggccggcaggcgagttgcccgcc
tcagagcgactttttcccgccgagtatggggagcagcgccaggccgccgaaatcgcgctc
tcgcaggcggtcacggtgctcacgggcggacccggcaccggcaagacgacgacggtcgcg
cggctgctggcgctggcggccgagcaggcggagtcggccggtgggccgcggccccgcgtc
gcgctggcggccccgaccggcaaggcggccgcgcggctgcaggaggcggtgacgcacgaa
gtggccaagctttccgccgccgaccgggagcgactgggcgaactgcgtgccgtgacgctg
catcggttgctcggccccaagcccggtacctcggcgcggtttcggcatgatcgcggaaat
cgattgccgcataacgtgatcgtggtcgacgagacgtccatggtgtcgttgacgctgatg
gcgcggctgctggaggcggtccgcccggacgcccggctggtgctggtcggcgatgccgac
cagctggcgtcggtggaggcaggtgcggtgctggccgacctcgtggacggcctgtcggcc
cgggacgacgtgcgggtggcgacgctgcggacctcgcaccggttcgggaagtcgatcggt
gcgctggccgacgcgatccgcgtcggcgatgcggatcgcgcgctggcgctgctgcgctcg
ggtgacgaacacatcgagtacctcgagtccggcgacggtgacgactcggccccgcggttg
cgctcaatcgtgctgccgcacgcgttgcggctgcgcgaagccgccgcgctgggcgccgtc
gacgtcgcgctgtcgacgctggacgagcaccggttgctgtgcgcccatcggcgggggcct
ttcggtgtggcgcactggaacgggttggtgcagaagtggattgccgaggagacgggccag
ccggcgtggtcgcagtggtacgcgggacgcccgctgctggtgacggcgaacgactacggg
ctgcgcgtctacaacggcgacaccggcgtaaccgtggccggcgccgaaggtctgcgggcc
gtcatcgacaccgcgaccggaccgctcgacttcgcgaccagccgcctcggtgacgtcgag
acgatgcatgccatgacgatccacaaaagccaaggcagccaggccgacgaggtgacggtg
ctgctgccgcaggaggattcgcggttgctgacgcgggagttgttctacacggcggtgacg
cgggcgaagaccaaggtgcgtgtcgttggttccgaggcgtcggtacgggccgcggtcggg
cgtcgggcgttgcgcgcgacggggttacggcagcggctacagtga
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