Mycobacterium malmoense: K3U93_05460
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Entry
K3U93_05460 CDS
T07571
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mmam
Mycobacterium malmoense
Brite
KEGG Orthology (KO) [BR:
mmam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmam03021
]
K3U93_05460
Transcription machinery [BR:
mmam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K3U93_05460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_24
HTH_3
MarR
MarR_2
Sigma70_ECF
DUF7343
HTH_IclR
KORA
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QZA18636
LinkDB
All DBs
Position
1151351..1152139
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AA seq
262 aa
AA seq
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MTARAGGGSASRPNEYADIPEMFRGLAGIAADSTEFQRQRDKIVERCLPLADHIARRFEG
RGEPRDDLVQVARVGLVNAVVRFDVEAGSDFVSFAVPTIMGEVRRHFRDNSWSVKVPRRL
KELHLRLGAATADLSQRLGRAPTATELAAELGMERDEVVEGLVAGSSYNTLSIDTGGGGE
DDDARAIADTLGDVDAGLDRIEDREALRPLLEALPERERMVLVLRFFESMTQTQIAERVG
ISQMHVSRLLAKSLARLRDQLQ
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcgcgagctggcggcggttcggcttcgcgcccgaacgaatatgccgacattccg
gagatgttccgtgggttggctggcatcgcggccgactccacggaatttcagcggcagcgg
gacaagatcgtcgagcgctgcctgccgctggccgatcacatcgcccgccggttcgagggc
cgcggcgagccgcgcgacgacctggttcaggtggcgcgggtcggcttggtgaacgcggtg
gtccgcttcgacgtcgaagccgggtcggacttcgtgtcgttcgcggtgcccacgatcatg
ggggaggtccgccgtcacttccgcgacaacagttggtcggtcaaggttccgcggcgcctc
aaggaactgcacctgcggctgggcgccgccaccgccgatctgtcgcaacggctcggaagg
gcgcccaccgcaaccgaactcgccgcggaactcggcatggaacgcgacgaggtcgtcgag
ggcctggtggcgggcagctcctacaacaccttgtccatcgacaccggtgggggcggcgaa
gatgacgacgcccgcgcgattgcggacacgttgggcgacgtggacgccggtctggaccgc
atcgaggaccgggaggcgctgcgtccgttgctcgaggcgttgcccgagcgggaacgaatg
gtgttggtgctcaggtttttcgagtcgatgacgcaaacgcagatcgccgagcgggtcggc
atctcgcagatgcacgtgtcgcggctgctggccaagtcgctcgcgcggctgcgcgaccag
ctgcaataa
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integrated database retrieval system
