Mycobacterium malmoense: K3U93_08525
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Entry
K3U93_08525 CDS
T07571
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mmam
Mycobacterium malmoense
Pathway
mmam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K3U93_08525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmam03019
]
K3U93_08525
03016 Transfer RNA biogenesis [BR:
mmam03016
]
K3U93_08525
Enzymes [BR:
mmam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K3U93_08525
Messenger RNA biogenesis [BR:
mmam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K3U93_08525
Transfer RNA biogenesis [BR:
mmam03016
]
Prokaryotic type
tRNA degradation factors
K3U93_08525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_NusA_1st
KH_PNO1_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QZA19155
LinkDB
All DBs
Position
1828436..1830745
Genome browser
AA seq
769 aa
AA seq
DB search
MSVAEIEEGVFEATAVIDNGSFGTRTIRFETGRLALQAAGAVVAYLDDENMLLSATTASK
NPKEHFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVDGLR
NEIQVVVTILSLDPNDLYDVLAINAASASTQLAGLPFSGPIGGVRVALIEGTWVAFPTVE
QLERAVFDMVVAGRIVGDADKKDIAIMMVEAEATENVIALVEGGAQAPTESVVAQGLEAA
KPFIAELCRAQQELADATGKSGKPTAEYPTFPEYGEDVYYSVSSLATDELAAALTIGGKA
ERNDRTDELKAQVLARLTGDSATYAGREKEVGAAFRSLTKKLVRQRILTDHFRIDGRGIT
DIRALSAEVAVVPRAHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETTKRYMHHYNF
PPFSTGETGRVGSPKRREIGHGALAERALVPVLPSVEEFPYAIRQVSEALGSNGSTSMGS
VCASTLALFNAGVPLKAPVAGIAMGLVSDDIEVEAGKTERRFVTLTDILGAEDAFGDMDF
KVAGTKDFVTALQLDTKLDGIPSQVLAGALAQAKDARLTILEVMAEAIDAPDEMSPYAPR
VTTIKVPVDKIGEVIGPKGKVINSITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINA
IANPQLPTVGERFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGKGKRIAKVEDVVHVGDK
LQVEIADIDKRGKISLVLVADDDSADSSAPADAGAPQEAAPADAATANS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagctgaaattgaagagggcgtgttcgaggcaaccgccgttatcgacaacggg
agcttcggcacccggaccatccgtttcgagaccggccgcctggccctgcaggccgccggc
gccgtcgtcgcctatctggacgacgagaacatgctgctgtcggcgaccaccgccagcaag
aaccccaaggagcacttcgacttcttcccgctgaccgtcgacgtcgaggagcggatgtat
gccgccggccgcatccccggttcgttcttccgccgcgagggccggccgtcgaccgacgcg
atcctgacctgccggctcatcgaccgcccgctgcgcccgtcgttcgtcgacggcctgcgc
aacgagatccaggtcgtggtgacgatcctgagcctggatcccaatgacctgtatgacgtg
ctggcgatcaacgccgcgtcggcgtccacccagctggctggtctgccgttctcgggaccg
atcggtggtgtgcgggtcgcgctgatcgagggcacctgggtggcattcccgaccgtggag
cagctcgagcgtgccgtcttcgacatggtggtggccggccgcatagtcggcgacgccgac
aaaaaagacatcgcgatcatgatggtcgaagccgaggccaccgaaaacgtcatcgcgctc
gtcgaggggggagcccaggcgccgacggaaagcgttgtggcccaagggctggaggcggcc
aagccgttcatcgcggagctgtgcagggcacagcaggagctggccgacgcgaccggaaaa
tcggggaagccaaccgccgaatacccgacgttccccgagtacggcgaggacgtgtactac
tcggtgtcctcgttggccaccgacgagctggccgccgccctgaccatcggcggcaaggcc
gaacgcaacgaccgcaccgacgagctcaaggcccaggtgctcgcgcggctcactggggac
tctgcaacctacgcgggccgtgagaaagaggtcggcgccgcgttccgctcgctgaccaag
aagctggtccgccagcgcatcctgaccgaccatttccgcatcgacggccgcggcatcacc
gacatccgcgcgttgtcggccgaggtcgccgtcgtcccgcgcgcgcacggcagcgcgctg
ttcgagcgcggcgagacccagatcctcggcgtcaccacgctggacatggtcaagatggcc
cagcagatcgactcgctgggtccggaaaccacgaaacggtatatgcaccactacaacttc
ccgccgttctccaccggcgagaccggccgggtcggctcgcccaagcggcgtgagatcggg
cacggcgcgctggccgagcgggccctggtgccggtgctgccgagcgtcgaggagttcccg
tacgccatccgacaggtgtccgaggcgctgggctccaacggctcgacgtcgatggggtcg
gtgtgcgcgtccacgctggcgctgttcaacgccggagtgcccctcaaggcgccggtggcc
ggcatcgcgatgggcctggtgtccgacgacatagaagttgaggccggcaagaccgagcgc
cgcttcgtcaccctgaccgatatcctcggcgccgaggacgcgttcggcgacatggacttc
aaggtcgccggcaccaaggacttcgtcaccgcgctgcagctcgacaccaagctggacggc
atcccctcccaggttctggcgggcgccctcgcgcaggccaaggatgcccggctgaccatc
ctggaggtcatggccgaggccatcgacgcgcccgacgagatgagcccgtacgcgccgcgg
gtgaccaccatcaaggtcccggtggacaagatcggtgaggtcatcggcccgaagggcaag
gtgatcaactcgatcaccgaggagaccggggcgcagatctccatcgaggacgacggcacc
gtgttcgtcggcgccaccgacggcccctcggcgcaggcggcgatcgacaagatcaacgcc
atcgccaatccgcagctgccgacggtgggcgagcggttcctcggaaccgtggtcaagaca
acggatttcggtgcgttcgtgtcgctgctgcccggtcgtgacggtctggtgcacatttcc
aagctcggcaagggcaagcgcatcgcgaaggtcgaggacgtcgtgcacgtcggcgacaag
ctgcaggtcgagatcgccgatatcgacaagcggggcaagatctctctggtcctggtggcc
gacgacgattcagcagacagctcggcccccgccgatgccggggctccccaggaggccgca
ccagccgatgccgcgacggccaacagctga
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