KEGG   Mycobacterium malmoense: K3U93_09855
Entry
K3U93_09855       CDS       T07571                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
mmam  Mycobacterium malmoense
Brite
KEGG Orthology (KO) [BR:mmam00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mmam02048]
    K3U93_09855 (cas8c)
Prokaryotic defense system [BR:mmam02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    K3U93_09855 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: QZA19389
LinkDB
Position
2093468..2095210
AA seq 580 aa
MLLASLNELHGLLVATDRLPPIGYRRKRVRFLVDLDDDGRCLSVIDTAPDETVRAVPEIG
RTSGVKPFLACDNGRYVLGLPRRVGDEARALRCHAAFLDLLIDAAAALDTTDRSAARQLR
VVAGFVSDRNRAISDFRRHGIVFDRDYKGELTAAGWRIAFRVNGVNPVELPAVQDWWAEI
VSDDLVGEAEGWCQVSGARSRLARKMPGVAVKPGTPQALISANFVAAERYNASQSGGARI
AVPVAIRSHQALNWLLADPHHHRGLGDLTFVWWLATDMEVDPFNVIARPFDDDVAAFLEK
PWTGWPGLSPSDSFRLLELSLTEGRVVIRFDHVSTLAEIEQRTRRWLELIARPGRNGTTY
RPTFRHLAKATAPPDEGNVRKARKDRAVEAFARAAVAGTPLPRPVLAALVGRCRAVPVPR
VGDRVDWLAVDARLACLNLHVHLEEDRMGEIHTAAELCGRMLAQLDAAQRAALGDDVNRT
IADRYYASASTMPKRVFAGLFKTASHHLATAGGSDGGKAAQVAISRRLAELVALLAEAGG
WPTALGLEQQADFALGYWDERQAGFRRAPADTDETTSEEA
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgctgctggcgagcctgaacgagctccacggcctactcgttgccacggatcgattgccc
ccgatcgggtaccggcgtaagcgcgtccggtttctcgtcgacctcgacgacgacgggcga
tgcctgtccgtcatcgacacggcgccggacgaaaccgtgcgggcggtgccggagatcggc
cggacgagcggtgtcaaaccgttcttggcatgcgacaacggccggtatgttcttggcctg
cccagacgcgttggcgacgaggctagggcgctcagatgccacgcggcgttcctggatctg
ctcatcgacgcggccgcggcgctggacaccacggaccgttcagcggcgcggcagctgcgg
gtggtcgccggctttgtgtccgaccggaatcgggcgatcagcgattttcgccgccacggc
atcgtgttcgaccgcgactacaagggggaactgacggcggccggctggcgaatcgcgttc
agggtcaacggtgtcaatcccgtcgagttgcccgcggtccaagactggtgggcggagatc
gtcagtgacgacctcgtcggcgaggccgaagggtggtgccaggtttcgggcgcccgatcg
cggctcgccaggaaaatgcccggcgtggccgtcaagcccggaacccctcaggcattgatc
tcggcgaatttcgtagccgcggaacgttacaacgcgagccagtccggcggcgcccggatc
gcggtgccggttgcgattcggagccaccaggcgctcaactggttgctggccgatccgcat
caccaccgcggtctcggcgacctgacgttcgtctggtggctggccactgatatggaagtc
gatccgttcaacgtgatcgcccggccattcgacgacgatgtcgcggctttcctcgaaaag
ccgtggaccggttggcccggactttcgccttcggacagcttccgcctgctcgagttgtcc
ctgaccgagggccgggtggtgatccgattcgatcatgtgagcacgctcgccgagatcgag
caacgcacacgacggtggctcgagctcattgcgcgcccgggccggaacggtacgacctac
cggcccacctttcggcaccttgccaaggcgaccgccccgcccgacgaggggaacgtgcga
aaggcgcgcaaggaccgggccgtcgaagcgttcgcccgcgcggcggtggcgggcacacca
ctgccacgcccggtgttggcggcgcttgtcggccgttgtcgcgccgttccggttccccgt
gtgggggacagggtcgactggctagccgtggacgctcgcctggcatgcctgaatctccat
gtgcacctcgaggaggatcggatgggtgaaatccacacggccgcagagctttgcggccgg
atgcttgcccagctcgacgccgcacagcgtgccgcgctcggcgacgacgtcaaccgcacg
atcgccgaccgctactacgccagcgcctcgacgatgccgaaaagggtcttcgcgggcctc
ttcaagaccgccagccaccacctggcgacggccggtggatcggacggcggcaaggccgcc
caggtcgcgatctcgcgccggttggccgagctggtcgcgttgctggccgaggcgggcggc
tggcccaccgcactcgggttggagcaacaggccgacttcgcgctcggctattgggacgaa
cggcaggcgggtttccgccgcgcgccggcggacaccgacgaaacaacctccgaggaggca
tga

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