Mycobacterium malmoense: K3U93_12020
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Entry
K3U93_12020 CDS
T07571
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
mmam
Mycobacterium malmoense
Brite
KEGG Orthology (KO) [BR:
mmam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmam03021
]
K3U93_12020
Transcription machinery [BR:
mmam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K3U93_12020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
MarR_2
HTH_23
HTH_Crp_2
MarR
KORA
HTH_24
Sigma70_ECF
HTH_Tnp_4
GerE
HTH_Tnp_ISL3
DUF7343
Trp_repressor
LacI
HTH_31
HTH_7
HTH_ParB
Maf_N
Motif
Other DBs
NCBI-ProteinID:
QZA19747
LinkDB
All DBs
Position
complement(2595860..2596669)
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AA seq
269 aa
AA seq
DB search
MTGVATAPRPTGRASRQSDDSYDDVVEMFAALRQMPAESHEYSRQRERIVARCLPLADHV
ASHFARRGEGLDDLTQVARLGLMNAINRFDPAKGPSFIGFAVPTMMGEVRRYFRDYSWGM
RVPRRLRELHVQISRATGDLAQRLGRAPTARELSEALEVSHEEIVECLIAGDAYRLESLD
APVGADSSGKPRLVADAVGGIDPQIEHITNREAVRVLVAALPQRERQVLHMRFFESMTQS
QIAERIGVSQMQVSRILANTLRCLRDQLE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcgtagcaaccgcgccccgccccaccgggcgggctagcagacaatcggacgat
tcctacgacgacgtcgtcgagatgttcgcagcgctgcgccagatgcccgcggaatcccac
gaatacagccggcaacgcgaacgcatcgtggcccgatgcctgcctctcgccgaccatgtg
gccagccacttcgcccgacgcggcgagggcctcgacgacctgactcaggtcgcgcgcctg
gggctgatgaacgcgatcaaccggttcgacccggccaaaggacccagcttcattggattc
gcggttcccaccatgatgggcgaggtccggcgctactttcgcgactacagctggggcatg
cgtgtgccgcgacgattgcgcgagctacacgtacagatcagcagggcgacaggggatttg
gcccagaggctgggacgcgcaccgacggccagggagctatccgaggcgctggaagtttcc
cacgaggaaatcgtcgaatgcctcatcgcgggcgacgcttaccggctggagtccctggac
gcgcccgtcggtgccgacagctccggcaagccgcggctggtggctgacgccgtcggtggt
atcgatccgcaaatagaacacatcaccaaccgggaagccgtgcgcgtcctggtggccgcg
ctcccccagcgcgaacgccaggttctacacatgcgattcttcgaatcgatgacgcaaagc
cagatcgccgagcgaatcggcgtgtcgcagatgcaagtctcgcgcatcctggccaacacc
ctgcgctgcctgcgcgaccaactggaatag
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