Mycobacterium malmoense: K3U93_19895
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Entry
K3U93_19895 CDS
T07571
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mmam
Mycobacterium malmoense
Pathway
mmam03420
Nucleotide excision repair
mmam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K3U93_19895 (pcrA)
03430 Mismatch repair
K3U93_19895 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmam03400
]
K3U93_19895 (pcrA)
Enzymes [BR:
mmam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K3U93_19895 (pcrA)
DNA repair and recombination proteins [BR:
mmam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K3U93_19895 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
K3U93_19895 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
DEAD
Motif
Other DBs
NCBI-ProteinID:
QZA16867
LinkDB
All DBs
Position
complement(4343711..4346056)
Genome browser
AA seq
781 aa
AA seq
DB search
MSVHATSNSEAKPAPEADQLLDGLNPQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRIAYL
IAARGVGVGQVLAITFTNKAAAEMRERVVRLVGDRARYMWVSTFHSTCVRILRNQASLIH
GLNSNFSIYDADDSRRLLQMIGRDMGLDIKRYSPRLLANAISNLKNELIDPDQALTNLAN
LSDDSDDLTRTVAGVYGEYQRRLRAANALDFDDLIGETVAVLQTFPEIAGYYRRRFRHVL
VDEYQDTNHAQYVLVRELVGRGAPEGQETQDVPPAELCVVGDADQSIYAFRGATIRNIED
FERDYPDAKTILLEQNYRSTQNILSAANSVIARNTGRREKRLWTDAGAGELIVGYVADNE
HDEARFVAEEIDALVDRGEITYNDVAVFYRTNNSSRSLEEVFIRAGIPYKVVGGVRFYER
KEIRDIVAYLRVLDNPGDAVSMRRILNTPRRGIGDRAEACVAVYAENTGASFADALVAAA
EGKVPMLNSRAEKAIAGFVELLDDLRGRLDDDLGDLVESVLERSGYRRELESSSDPQELA
RLDNLNELVSVAHEFSTDQANAAALQTPDDEDVPDTGALAAFLERVSLVADADEIPEHGA
GVVTLMTLHTAKGLEFPVVFVTGWEDGMFPHMRSLDNPTELSEERRLAYVGITRARQRLY
VSRAMVRSSWGQPMLNPESRFLREIPQELIDWRRSAPAPSFSAPVSGAGRFGTPRTAPTR
SGAGKRPLLVLQPGDRVTHDKYGLGRVEEVSGVGESAMSLIDFGSSGRVKLMHNHAPLSK
L
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcacgcgaccagtaactccgaagccaagcccgcccccgaagcagaccagctg
ctcgacggcctcaacccgcaacagcgccaagcggtggtacacgagggttcgccgctgctg
atcgtggccggggcgggctcgggtaagacggcggtgttaacccggcgcatcgcctacctg
atcgcggcgcgcggcgtcggggtcggtcaggtgctggccatcacgttcaccaacaaggcc
gccgcggagatgcgcgaacgcgtggtgcgactggtcggggatcgggcccgctacatgtgg
gtgtcgacgttccactccacttgcgtgcgcatcctgcgcaaccaggcgtcactgatccac
ggactcaattccaacttttcgatctacgacgccgacgattcgcggcgtctgttgcagatg
atcggccgcgacatgggcctcgacatcaagcgctactcgccgcgtctgctggccaacgcc
atctccaatttgaagaacgagttgatcgaccccgaccaggctctgacaaatttagccaac
ctgtcggatgattccgacgacctgacccgcaccgtggccggcgtctacggcgaataccag
cgacggctgcgggcggccaacgcgttggacttcgacgacctgatcggggaaaccgtggcg
gtgctacagaccttcccggagatcgccgggtactaccggcggcggttccgccacgtgctg
gtcgacgagtaccaggacaccaaccacgcgcagtacgtgctggtgcgggaattggtcggt
cgcggcgccccggaaggccaagagacgcaggacgtgccgccggcggagttgtgcgtggtc
ggcgatgccgaccagtcgatctatgcgttccgcggcgccaccatccgcaacatcgaggac
ttcgaacgcgactatccggacgcgaaaacgattctgctggaacagaattaccgctcgacg
caaaatatcttgtcggcggccaactccgtgatcgcccgcaacaccggacggcgtgagaaa
cggctgtggaccgacgcgggcgccggcgagctgatcgtcggctacgtcgccgacaacgag
cacgacgaggccaggttcgtcgccgaggagatcgacgcgctcgtcgatcgcggcgagatc
acctacaacgacgtggccgtcttctatcgcaccaacaactcgtcgcggtcgctggaagag
gtgttcatccgcgccggaattccgtacaaagtcgttggaggagtgcgcttttacgagcgc
aaggagatccgcgacatcgtcgcctacctgcgggtgctggacaaccccggcgacgcggtc
agcatgcggcgcatcctcaacacgccccgccggggcatcggcgatcgggccgaggcgtgc
gtggcggtgtacgccgagaacaccggcgccagcttcgccgatgccctggtggccgcggcc
gaaggcaaagtgccgatgctaaacagccgcgcggagaaggcgatcgcgggcttcgtcgag
ctgctcgacgacctgaggggacgcctcgatgacgacctgggcgatctggtcgagtcggtg
ctggaacgcagcggataccgcagggagctggagtcgtcaagcgatccacaggagttggcc
cggctggacaacctcaacgaattagtcagtgtcgcacacgaattcagcaccgatcaggcc
aacgcggccgctttgcagaccccggacgacgaagacgtgccggacaccggtgcgctggcg
gcgtttctggagcgggtgtcgctggtcgccgacgccgacgagatccccgagcatggtgcc
ggtgtggtcacgctgatgacgctgcacaccgcgaagggtttggagtttccggtggtgttc
gtcaccggctgggaggacgggatgttcccgcacatgcggtcgctcgacaatcccaccgaa
ctctcggaggagcggcggctggcctacgtcggcatcacccgggcccgtcagcggctgtat
gtgagcagggccatggtccggtcgtcttgggggcagccgatgctcaacccggaatcgcgg
ttcctgcgcgagatcccgcaggagctcatcgactggcggcgcagtgcacccgcgccgtcg
ttcagcgcgccggtcagcggtgcgggccggtttggtacgccgcgcacggccccgacccgc
tcgggggcgggcaaacgcccgctgctggtgctgcagcccggcgatcgggtgacccacgac
aagtacgggctgggccgggtcgaggaagtctcgggcgtcggcgaatcggcgatgtcgctg
atcgacttcggcagctccggacgggtgaagctgatgcacaaccacgccccgctcagcaag
ctttaa
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integrated database retrieval system
