Mycobacterium malmoense: K3U93_19915
Help
Entry
K3U93_19915 CDS
T07571
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mmam
Mycobacterium malmoense
Pathway
mmam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K3U93_19915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmam03400
]
K3U93_19915
Enzymes [BR:
mmam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
K3U93_19915
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K3U93_19915
DNA repair and recombination proteins [BR:
mmam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K3U93_19915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
DUF7577
Motif
Other DBs
NCBI-ProteinID:
QZA16871
LinkDB
All DBs
Position
complement(4349729..4350592)
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEIEALVDHLRRHAVGLTIGRVDVAALSVLKTFDPPISALHGQVVTGAARWGKYLG
LQAGKLFLIAHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGTPGEAPGFDLTEAGTQK
RLAVWLVDDPRLVPGIAGLGPDALDLGVDDLAGLLAGNTGRIKTVITDQKVIAGIGNAYS
DEILHVAKISPFAIAGKLTGGQLTALHDAMVSVLTDAVSRLVGQGAAMLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgccggagatcgaagcgctggtcgaccatttgcggcgccacgccgtcggt
ttgacgatcggccgcgtcgacgtcgccgcgctgtcggtgctgaaaaccttcgacccgccg
atcagcgccctgcacggccaggtcgtgaccggggccgcccggtggggcaagtacttgggg
ctgcaggccggaaagctgttcctgatcgcccacctgtcgcgcgcgggctggctgcggtgg
tccgacaagctcgccgctgcgccgctgcgccccggcaagggaccgatcgcgttgcgggtg
cacctgggcacgccgggtgaggcgcccggctttgacctcaccgaggccggcacccaaaag
cggctggcggtgtggctcgtcgacgacccgcggctggtgccgggcatcgcgggcctcggc
ccggacgcgctggacctcggtgtcgacgacctggccgggctgctggccggcaacaccggc
cggatcaagaccgtcatcaccgaccagaaggtgatcgccggcatcggcaacgcctacagc
gacgaaatcctgcacgtcgcgaagatctcgccgttcgccatcgccgggaagctgaccggc
ggacagctcaccgcgctgcacgacgcgatggtgtcggtgctgaccgacgcggtcagccgg
ttggtcggccagggtgccgccatgctcaaaggggagaagcgttccggactgagggtgcac
gcgcgcaccgggctgccctgcccggtgtgcggggacaccgtgcgcgaagtgtccttcgcg
gacaagtcttttcagtactgtccgacgtgccagacgggcggcaaggtgctggccgaccgg
cgcatgtcgcggctgctgaagtaa
DBGET
integrated database retrieval system
