Mycobacterium mantenii: MMAN_13420
Help
Entry
MMAN_13420 CDS
T07431
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mman
Mycobacterium mantenii
Brite
KEGG Orthology (KO) [BR:
mman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mman03019
]
MMAN_13420 (hrpA)
Enzymes [BR:
mman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MMAN_13420 (hrpA)
Messenger RNA biogenesis [BR:
mman03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MMAN_13420 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
NACHT
AAA_19
nSTAND3
ABC_tran
PhoH
T2SSE
TsaE
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BBY37208
LinkDB
All DBs
Position
1440616..1444542
Genome browser
AA seq
1308 aa
AA seq
DB search
MPTLCGVAEPSVAQLRKQLDGVPLRDAARIGRRLKNLRGASPEKLRQLAEQIAAAHKVVA
ARQAAVPTVTYPDLPVSERRREIADAIRANQVVVIAGETGSGKTTQLPKICLEAGRGIRG
TIGHTQPRRLAARTVAQRIADELGGPLGDAVGYTVRFTDQVSDRTLIKLMTDGILLAEIQ
RDRRLLRYDTLILDEAHERSLNIDFLLGYLRELLPRRPDLKVIITSATIEPQRFAAHFEN
APIIEVSGRTYPVEVRYRPLEVAVPSVSDDDPDDPDHEIVRTQIRDELEAIVDAIGELEA
EPPGDILVFLSGEREIRDTAEALSGLKHTEVLPLYARLPTAEQQKVFAPHTGRRVVLATN
VAETSLTVPGIRYVIDPGNARISRYSRRLKVQRLPIEPISQASAAQRAGRCGRVAPGVCI
RLYSEQDFAVRPRYTDPEILRTNLAAVLLQMAALQLGDIEEFPFLDPPDRRSVRDGAQLL
AELGAFDGHGAITDLGRRLARLPVDPRLGRMILQAQTEGCVREMLVLAAALTIPDPRERP
SDREEAARDKHARFADEHSDFMSYLNLWRYLREKRKSLSGNAFRRMCRSEFLHYLRIREW
QDLVGQLRSIARDLGIVEDASSDEPADPARVHAALLAGLLSHVGMRREDTREYLGARNSH
FVLAPGSVLTKRPPRWVVVAELVETSRLYGRTAARTQPEVVERVAGDLVQRTYSEPHWDA
ARGEVLAYERVTLYGLPLVARRRVGYARIEPVVARELFIRHALVEGQWHTRHHFFRDNAR
LRAELEELEERARRRDLLVGDDDVYALYDARVPAHVVSARHFDSWWKKQRHKKPDLLTFA
RVDLLRTDETGDTDRPNTWRTGDVALPLTYRFEPGAADDGVTVHVPIDVLARLGGDEFAW
QVPALREELVTALIRSLPKDLRRNFVPAPDTARAVLSAIDPTGEPLLLALQRELRRRTGI
LVPVDAFDLDRLPSHLRVTFAVESGDGTEVARGKDLGVLQERLTTPARQAVAQAVAGELE
RTGLRGWPEDLEELPRVVERTIDGRTVRGFPALVDSGANVDLRVFATSSEQDRTMAPGIR
RLVRLSVASPVKAIARQLDPRSRLALGSNPDGDLSALLEDCADAATDALVAAPVWTRAEF
VALQQRAGKSLLPTTVDIVHRVEKVLAAAQEVQLVVPENPPPAQADAIADIRVQLNRLLP
AGFVTATGAAHLADLTRYLLAIRRRLDGLAHGIQADRERMQRVLSVQDAYDELVRELPQP
ATTAAGVRDISKQIEEFRVSLWAQQLGTPRPVSEQRIYRAIDAVRDAL
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
gtgcctactctgtgcggggtggccgaaccgtccgtagcgcaactgcgcaaacagctcgac
ggtgtacccctgcgcgacgccgcccgcatcggccgacgcctgaagaacctccgcggcgcc
tcgcccgaaaagctgcggcagctggccgaacagatcgccgcggcgcacaaggtcgtcgcc
gcccggcaggccgccgtgcccacggtcacctaccccgacctgccggtcagcgagcgccgc
cgggaaattgccgacgcgatacgggcaaatcaggtggtcgtcatcgccggggagaccggg
tcggggaagaccacgcagttacccaagatctgtctcgaggcaggccgcggtatccgcgga
accatcgggcacacccagccccgccgcctggccgcccgcaccgtcgcgcagcgcatcgcc
gacgagctgggcggcccgctcggcgacgccgtcggctataccgtgcggttcaccgaccag
gtcagcgaccgcacgctgatcaagctgatgaccgacggcatcctgctcgccgagatccag
cgcgaccgccgtctgctgcgctacgacacgctgatcctcgacgaggcccacgagcgcagc
ctcaatatcgatttcctgctcggctacctgcgcgagttgctgccgcgccgcccagacctg
aaggtgatcatcacctcggccacgatcgagccccagcgcttcgccgcgcacttcgagaac
gcgcccatcatcgaggtgtccgggcggacatatccggtcgaggtgcgctaccggccgctg
gaggtcgccgtgccgtccgtctccgacgacgatcccgacgaccccgaccacgaaatcgtg
cgaacccagatccgcgacgagctcgaggcgatcgtcgacgccatcggcgaactcgaggcc
gagccgccgggcgacatcctggtctttctctcgggggagcgcgagatccgcgacaccgca
gaggctttgagcggcctcaagcacaccgaggtgctcccgctgtacgcccggctccccacc
gccgaacaacagaaggtgttcgcgccccacaccgggcgccgtgtcgtgctggcgaccaat
gtcgccgaaacctcgttgaccgtcccggggatccgctatgtcatcgacccgggcaatgcc
cgcatttcgcgctacagccgccggttgaaggtgcagcggctgccgatcgagcccatctcg
caggcgtcggccgcacagcgggccggccggtgcggccgcgtcgcccccggcgtgtgcata
cggctctactccgagcaggacttcgcggtccggccgcgctacaccgaccccgagatactg
cggaccaacctcgccgccgtgctgctgcagatggcggccctgcagctcggcgacatcgag
gaatttcccttcctcgatccgccggatcggcgcagcgtccgcgacggcgcgcagctgctg
gccgaactcggcgcgttcgacggccacggcgcgatcaccgacctcggtcgccgcctggca
cgcctgcccgtcgatccgaggctgggccggatgattctgcaggcacagaccgaggggtgt
gtgcgcgaaatgttggtgttggccgcggcgctcacgatcccggatccgcgggaacggcca
agcgaccgcgaggaggcggcccgcgacaagcatgcccgtttcgccgacgagcactccgac
ttcatgtcctacctcaacctgtggcgctatctgcgtgagaaacggaagtcgttatccggc
aatgcgtttcgacggatgtgccgttcggagtttctgcactatctgcgcattcgcgagtgg
caggacctggtcgggcagctgcgcagcatcgcccgcgacctgggcatcgtcgaagacgca
tcgtcggatgagccggccgatccggcgcgggtgcatgcggcgctgcttgcggggctgctg
tcgcacgtgggcatgcggcgcgaagacacccgcgagtatctgggcgcgcgcaactcgcac
ttcgtcctggcacccggctcggtgctcaccaaacggccaccgcgctgggtcgtcgtcgcg
gagctggtcgagacgagccggctgtacgggcgaacggcggcccgcacgcagcccgaggtg
gtggagcgggtcgcgggcgacctggtgcagcgcacctacagcgaaccgcactgggacgcc
gcgcgcggcgaggtgctggcctacgagcgggtgacgctgtacgggctgccgctcgtcgcg
cgccgccgcgtcggatacgcccgcatcgagccggtggtggcgcgggaattgttcatccgc
catgcgctggtcgaaggacagtggcacacccgccatcacttcttccgcgacaacgcacgg
ctgcgggccgagctcgaggagctggaggagcgggcccgccgccgcgacctgctggtcggc
gacgacgacgtgtatgcgctctacgacgcccgggttcccgcccatgtcgtctcggcgcgg
cacttcgactcctggtggaaaaagcagcgacacaagaaaccggacctgctcaccttcgcc
cgcgtcgacctgctgcgcaccgacgagacgggcgacacggaccggccgaacacatggcgg
acgggcgatgtcgcgctgccgctgacctaccggttcgagcccggcgccgccgacgacggg
gtcaccgtgcatgtgcccatcgacgtgctggcccgcctgggcggcgatgagttcgcctgg
caggtcccggcgctgcgcgaggagctggtgaccgcgctcatccgctcgctgccgaaagac
ctgcgccgcaacttcgttcccgccccggacacggcccgcgcggtgctgtccgcaatcgac
ccgaccggtgaaccgctgctgctggcgctgcaacgcgaattacgccgtcggactggaatt
ttggtgccggtcgatgccttcgacctggacaggctgccatcgcatttgcgggtcacgttc
gcggtcgagtccggcgacggcaccgaggtggcccgcggcaaggatctgggggtactgcag
gaacggctcaccacgccggcccggcaggccgtcgcgcaggcggtggcgggcgagctggaa
cggacggggttgcgcggctggcccgaggacctcgaagaactgccgcgcgtcgtggaacgc
acgatcgacgggcgcaccgtgcggggctttccggcgttggtcgactcgggtgccaacgtc
gacctccgcgtgttcgccacctcgtcggagcaggatcggacaatggcacccggcatccgg
cggctggtgcggctcagcgtcgcatcaccggtcaaagctattgcgcgtcaacttgatccg
cgttcccggttggccctcggcagcaacccggacggcgacttgagtgcgctgctggaggac
tgcgccgacgccgcgaccgacgccctcgtggccgcgccggtgtggacccgtgcggagttc
gtcgcgctgcaacagcgggcaggaaagtccttgctgcccactaccgtcgacatcgtgcac
cgcgtcgagaaggtactggccgccgctcaggaggtccaactcgtggtgcccgaaaacccg
ccgcccgcgcaggccgatgcgatcgccgacatccgtgtccagctgaatcggctgttgccg
gccgggttcgtcaccgccaccggcgccgcacacctcgccgatctcactcgctacctgctc
gcgatccgccgccgcctcgacggcctggcccacgggatccaggccgatcgagagcggatg
cagcgggtgctgtccgtgcaggacgcctacgacgagctggtgcgcgagctgccgcagccg
gcaacgacagccgccggcgtacgcgatatctccaagcagatcgaggaattcagggtcagc
ctgtgggcccagcaactcggcacgccccgcccggtcagcgagcagcggatctaccgcgcg
atcgacgccgtgcgcgacgctttgtga
DBGET
integrated database retrieval system
