Methanococcus maripaludis OS7: MMOS7_11270
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Entry
MMOS7_11270 CDS
T03693
Symbol
rpa
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
mmao
Methanococcus maripaludis OS7
Pathway
mmao03030
DNA replication
mmao03420
Nucleotide excision repair
mmao03430
Mismatch repair
mmao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMOS7_11270 (rpa)
03420 Nucleotide excision repair
MMOS7_11270 (rpa)
03430 Mismatch repair
MMOS7_11270 (rpa)
03440 Homologous recombination
MMOS7_11270 (rpa)
03460 Fanconi anemia pathway
MMOS7_11270 (rpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmao03000
]
MMOS7_11270 (rpa)
03032 DNA replication proteins [BR:
mmao03032
]
MMOS7_11270 (rpa)
03400 DNA repair and recombination proteins [BR:
mmao03400
]
MMOS7_11270 (rpa)
Transcription factors [BR:
mmao03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MMOS7_11270 (rpa)
DNA replication proteins [BR:
mmao03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MMOS7_11270 (rpa)
DNA repair and recombination proteins [BR:
mmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MMOS7_11270 (rpa)
MMR (mismatch excision repair)
MMOS7_11270 (rpa)
DSBR (double strand breaks repair)
HR (homologous recombination)
MMOS7_11270 (rpa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
OB_Ssb-like
Rep_fac-A_C
DUF3127
POT1
OB_POT1A
OB_MEIOB_N
DZR_2
Zn_Ribbon_TF
FYVE
DUF2536
Zn_ribbon_GTF2H2
Motif
Other DBs
NCBI-ProteinID:
BAP63213
UniProt:
A0A2Z5PJA6
LinkDB
All DBs
Position
complement(1103144..1105072)
Genome browser
AA seq
642 aa
AA seq
DB search
MNIDKLKQKILSKISEKELEKKVNEKIEENSGLLGEESAVMLVAQELGIEITYGDDEEEY
DFSIKDIADGQKNVEVTGKIIEISPAKDFNRKDGSTGKLASVTIGDNTGITRLTFWNDKT
DLIEGLKKGDVVKIENAFSRKWNDKVELNSGSELSIEKLKKYDESRYPILKDNYKISELM
PNLSGTINAEVVTAYPKKEFSRKDGTKGQLKSLFLKDDTGSIRGTLWNELADFEVKKGDI
AEVSGYVKQGYSGLEISVDNIGIIEKSVKEEKPVEKLSISELTSFDGEYVTVSGNIVNIS
GSREVQFSDRTAEVQDIYINDGTGMVKTAFWGTNRSILDGLKEGDYVTISNAKLRTYTDN
TGEKRADLTYNYMSELKKDESASKKILEEITEIKDILNGSAENSDVTVVAMVTNAYPVNE
FQRSSGGTGKVRNIMLEDGTGSIRMALWDSDAETEISEGDVVKLIHGYAKESGEYMDLST
GRFGRIEVNPKGVSIKSPRNYIADLEEGVSTEISGTIVDYRKQDVILNLCPNCRKRLNLV
DNKYLCEVCGEVEPNELLVSNLTVDDGTGVINCRVYGNNVEKVTELSKNKLKEMNMDALA
DVLGKDVLFYGTPSFRNDDLEFAVKRVNFVDVSKELEVLKQL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgacaagttaaaacaaaaaatattatcaaaaatctcagaaaaagagcttgag
aaaaaagtaaatgaaaaaatcgaggaaaattccggacttcttggcgaagaaagtgcagta
atgctggttgcacaggaactcgggatagaaataacttacggcgatgatgaagaagaatat
gatttttcgattaaagatatcgctgacgggcagaaaaatgttgaagtcacaggaaaaatt
attgaaatttcgcctgcaaaagactttaatagaaaagatggaagcactggaaaacttgca
tcagttactatcggggacaatactggaattactagacttacgttttggaacgacaaaacg
gatcttattgaaggattaaaaaaaggggacgttgtaaaaattgaaaatgcattcagcaga
aagtggaatgataaggttgaattaaacagcggttcagaattatcaatcgaaaaacttaaa
aaatacgatgaatcgagatatcctattttaaaagataattataagatttcagaattaatg
ccgaatttatcagggacaataaatgcagaagttgttacagcatatcctaaaaaagaattc
agcagaaaagatggaacaaaaggtcagctaaaatctttatttttaaaagatgatacagga
agtataaggggaactctctggaatgaacttgcagattttgaagttaaaaaaggagatatc
gcagaagtaagcggttatgtaaaacagggttattcaggacttgaaatttctgttgataat
attggaataattgaaaaatcagttaaagaagaaaaacctgttgaaaaattgagtatttct
gaacttacaagctttgatggggaatacgtcacagtttctggaaatattgttaacatttct
ggttcaagagaagtccaatttagcgatagaactgcagaagttcaggatatttacataaac
gatggaactggaatggtaaaaactgcattctggggtacaaacaggagtattcttgacggc
ttaaaagaaggagattacgtaacaatctcaaatgctaaattaagaacctacactgataat
actggtgaaaaaagggctgatttaacttataactacatgtcagaacttaaaaaagacgaa
agtgcaagtaaaaaaatattagaagaaataaccgaaattaaagatattttaaatggaagt
gcagaaaactccgatgtaacagttgttgcaatggttacaaatgcatatccggtaaatgag
ttccaaagaagcagtggtggaactggaaaagttagaaatattatgttagaagatggaact
ggaagcataagaatggctttatgggatagtgacgcagaaaccgaaatttccgaaggagac
gttgtaaagctaatacacgggtatgctaaagaaagtggagaatacatggatttatcaaca
ggacggtttggaagaattgaagtaaatccaaaaggagtttcaataaaatctccaagaaat
tatatcgcagaccttgaagaaggagtttcaaccgaaattagcggaactattgtagactac
agaaaacaagacgtaattcttaacttatgtccaaactgtaggaaaagattgaatttagtt
gataataaatacctgtgcgaagtttgtggagaagttgaaccaaacgagcttttagtttca
aatttaacagttgatgatggtacaggcgttattaactgtagggtatatggaaacaatgtt
gaaaaagtaactgaactttcaaaaaataaattaaaagaaatgaatatggatgcacttgca
gatgtgcttggaaaagatgttttattctatggaaccccttcatttagaaatgatgactta
gaatttgcagtaaaacgggttaatttcgtagatgtatcaaaagaattggaagttttaaag
caactttaa
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