Martes martes (European pine marten): 308336892
Help
Entry
308336892 CDS
T12008
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform 1
KO
K14407
cleavage stimulation factor subunit 2
Organism
mmaq Martes martes (European pine marten)
Pathway
mmaq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmaq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
308336892 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmaq03019
]
308336892 (CSTF2)
Messenger RNA biogenesis [BR:
mmaq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
308336892 (CSTF2)
U7-dependent histone pre-mRNA processing factors
308336892 (CSTF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
308336892
NCBI-ProteinID:
XP_080650883
LinkDB
All DBs
Position
X:76563371..76589211
Genome browser
AA seq
631 aa
AA seq
DB search
MAGLTVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGETIS
PEDAPESISKAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTNIPTLIAGNPQPVHSAGPGSGSTVSMNQQNPQAPQAQALGGMHVN
GAPSLMQASMQAGVPAPGQIPAAVTGPGPGSLAPGGGMQAQVGMPGSGPVSIERGQGTLQ
HSPVGPAGPASIERVQGQRTWMIWASVRGCTPSLLVSGGLDGIAVLPMQDPRAAMQRGPL
PANVPTPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHVPGHDSRGPPPHE
MRGGPLAEPRPLMAEPRGPMLDQRGPPLDGRGGRDPRGIDARGMEARAMEARGLDARGLE
ARAMEARAMEARAMEARAMEARAMEARAMEVRGIEARSMDTRGPVPGPRGPMPTGIQGPS
PINMGAVGPQGSRQVPVMQGAGMQGASIQGGGQPGGFSPGQNQVTPQDHEKAALIMQVLQ
LTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttgactgtgagagaccctgcggtagatcgttctctgcgttcggtgttcgtg
gggaacattccatatgaggctactgaagagcaattaaaggacatcttttctgaggttgga
cccgttgttagtttcaggttggtatatgatagggagacaggaaagccaaagggttatggc
ttctgtgaataccaagaccaggagacagcacttagtgccatgcgaaacctgaatgggcgt
gaattcagtgggagagcacttagagtggacaatgctgccagtgaaaagaacaaagaagag
ctgaagagccttggcactggtgcccctgtcattgagtcaccttatggagagaccatcagt
cctgaggatgcccctgagtccattagcaaagcagttgccagtcttccaccagagcagatg
tttgagctgatgaaacaaatgaagctttgtgtccagaatagtccccaggaagcacggaac
atgttgcttcagaaccctcagctggcttatgctttgctacaagctcaggtagtgatgaga
attgtggatccagagattgctctgaaaattctgcatcgccagacaaatatcccaacactg
attgcaggcaaccctcagccagtccacagtgctgggcctggctcaggatccactgtgtca
atgaaccagcagaatcctcaggcccctcaggcccaggctttgggtggaatgcatgtcaat
ggtgcaccttctctgatgcaagcttctatgcaggctggagttccagcaccaggacagata
ccagcggctgtaacagggcctggtcctggttccttagctcctggaggaggaatgcaagcc
caggttggaatgccaggaagtggaccagtgtccattgagcgaggacaaggaaccctacag
cactcgcccgtgggacccgccgggcctgcatcaattgagcgagttcaagggcagagaaca
tggatgatatgggcatctgtccgaggctgtactccctccctactggtgtcaggaggcttg
gatggaatagcagtcttgccgatgcaggaccccagagccgctatgcagcgtgggcccttg
cctgccaacgtcccaactcctcgaggtctattaggagacgccccaaatgacccgcgtgga
ggcactttactttctgtaactggagaggtagagcctagaggttacctgggaccacctcac
cagggtccacccatgcaccatgtccctggccatgacagccgtggcccacccccacatgag
atgaggggagggccattagctgagcccagacctttaatggcagagccaagaggacctatg
ctagatcagaggggtccacccttggatggcagaggcggaagagatccccgaggcatagac
gcacgaggaatggaggcacgagccatggaggctagaggattagatgccagaggattggag
gcccgagcaatggaagcccgtgcaatggaggcccgtgcaatggaggcccgtgcaatggag
gcccgcgcgatggaggcccgcgcgatggaagtcagagggatagaggccagaagtatggat
acaaggggcccggtccctggccctagaggccctatgcctactggaatccagggtcccagt
ccaattaacatgggggcagttggcccccagggatccagacaggtcccagtcatgcaggga
gcaggcatgcaaggagcaagcattcagggtggaggtcagcctgggggctttagtcctggc
cagaaccaagttaccccacaggaccatgagaaggctgctttgatcatgcaggttcttcag
ctgactgcggaccagatcgccatgctgcctccggagcagaggcagagtatcctgatctta
aaggaacaaatacagaaatccactggagcaccttga
DBGET
integrated database retrieval system
