Martes martes (European pine marten): 308337891
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Entry
308337891 CDS
T12008
Symbol
HDAC6
Name
(RefSeq) protein deacetylase HDAC6 isoform 4
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mmaq Martes martes (European pine marten)
Pathway
mmaq04613
Neutrophil extracellular trap formation
mmaq05014
Amyotrophic lateral sclerosis
mmaq05034
Alcoholism
mmaq05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mmaq00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
308337891 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
308337891 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
308337891 (HDAC6)
09165 Substance dependence
05034 Alcoholism
308337891 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmaq01009
]
308337891 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmaq03019
]
308337891 (HDAC6)
04131 Membrane trafficking [BR:
mmaq04131
]
308337891 (HDAC6)
03036 Chromosome and associated proteins [BR:
mmaq03036
]
308337891 (HDAC6)
Enzymes [BR:
mmaq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
308337891 (HDAC6)
Protein phosphatases and associated proteins [BR:
mmaq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
308337891 (HDAC6)
Messenger RNA biogenesis [BR:
mmaq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
308337891 (HDAC6)
Membrane trafficking [BR:
mmaq04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
308337891 (HDAC6)
Chromosome and associated proteins [BR:
mmaq03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
308337891 (HDAC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
308337891
NCBI-ProteinID:
XP_080687563
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MTSTGQDTTTTRQRRSRHNPHSPPHDSSVTSKRGVKKGALLHSSPSLAEVKKKGRMKKLT
QATEQDLIVDLQGLDLNLEAKTLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELHILADTYDSVYLHPNS
YTCACLASGSVLRLVDAVVGNEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQK
KHAVQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTVGFGRG
QGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPILESPGAPCPSA
QTSLSCALEALEPFWEVLVRSAETLEEDFLEEENVEKEEEGPWQPPALAIPTWPVLQART
GLVYDQRMMGHYNLWDNHHPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAELLTCHS
AEYIGRLRATAKMKTRELHREGSNFDSIYICPGTFACAQLATGAACRLVEAVLAGEVLNG
AAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFE
EDPSVLYISLHRYDHGTFFPMGDEGASCQTGRAAGTGFTVNVAWNGPRVGDADYLAAWHR
LVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEGG
YNLTSISESMAACTRSLLGDPPPLLNLSRPPLSGALASITETIHIHRRYWRSLRVMKVED
KEGPSSSKSITKKVTQPANRGSGVGMTAPDGNIPDADAGKPTSASPVAASTPDQAKSETT
VVEFSRDQISEAPTGEDTADQTPSEAATGEAAVDQTPSEAATEGATQDQTPSEEAVGGAE
MIQTPPALCTDNQTPPALPAQGATTQIPPSKLTENLRNLDLNSEAQEAADSQIPEDERLL
GEAAGGQDRDASGLTQSFEEHADADQVMLYAVTPLPWCPHLVAVRPVPESGLDVTQPCRD
CGTLQENWVCLSCYQVYCGRYVGAHMLQHHEVSGHPLVLSYVDLSTWCYNCEAYVHHQVG
SPGCEERCSPEQVWGAHTSLTLNVRMCSPSPSSEDLDEGQRHSIPSGRHFSPPQGCQFQH
KYFVRGL
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaggataccaccacaaccaggcagcgaaggagtaggcataacccc
cattcgcccccccacgactccagcgtcacgtcgaagcgaggtgttaagaagggtgcctta
ctccactccagtcctagtctggcagaggtaaagaagaaaggcagaatgaagaaactcacc
caagccacagagcaagacctaatcgtggacctgcaagggctggatctgaaccttgaggcc
aagacactgtctggcacgggcttggtgttcgatgagcagctaaatgaattccactgcctc
tgggatgacagcttccctgaaggccctgagcggctccatgccatcaaggaacagctgatc
caggagggccttctggaccgctgcgtgtccttccaggctcgttttgctgaaaaggaggag
ctgatgttggttcacagcctagaatacatcgatctgatggagacgacccagtacatgaat
gagggagagctacacatcctagcagacacctatgactcagtttacctgcatccgaactca
tatacctgtgcctgtctggcctcaggctctgtcctcaggctggtggatgcggtcgtgggg
aacgagatccggaatggcatggccatcatcaggcctcccggacaccatgctcagcatagt
cttatggatggatattgcatgttcaaccatgtggccgtggctgcccgctacgctcaaaag
aagcacgccgttcagagggtccttatcgtggactgggacgtgcaccatggtcaaggaaca
cagtttacctttgaccaggaccccagcgtcctctatttttccatccaccgctatgagcag
ggtcggttctggccccacctgaaggcctctaactggtccaccgtaggttttggccgaggc
cagggatataccatcaatgtgccttggaaccaggtggggatgcgagatgccgactacatt
gctgctttcctgcacctccttctgccagtcgcccttgagttccagccccagctggtcctg
gtggccgctggatttgatgccctccaaggggaccccaagggtgagatggccgccactccg
gcagggtttgctcagctaacccacctgctcatgggtctggcaggaggcaagctgatcctg
tctctggagggtggctacaacctccgttccctggctgagggcgtcagcgcctccctccac
acccttctgggagacccttgccccatactggagtctcctggtgccccctgcccaagtgcc
cagacgtccctgtcctgtgctctggaagccctggagcccttctgggaggtccttgtaaga
tcagctgagaccctggaggaggactttctggaggaagagaacgtggagaaggaagaagag
ggaccgtggcagcccccggcgctcgcaatcccgacgtggcccgtgctacaggctcgcaca
gggctggtctatgaccagcggatgatgggtcactacaacttgtgggacaaccaccaccca
gagatgcctcagcgagtctttcggatcatgcgccgtttggaagaactgggccttgcgggg
cgctgccttacgttgcccacacgtcccgccacagacgcagaactgctcacctgccacagt
gctgagtacataggtcgactgcgggccacagcgaagatgaaaacccgggagctgcaccgc
gagggctccaacttcgactccatttacatctgcccgggcacctttgcctgtgcgcagctg
gccactggcgccgcctgccgcctggtggaggccgtgctggccggagaggttttgaatggc
gctgctgtggtgcggcccccaggacaccatgctgagcgggatgcagcgtgtggtttttgc
tttttcaactctgtggctgtggctgctcgtcatgcccaagccatcagtgggcatgcgctg
cggatcctcatagtggactgggacgtccatcacggtaatggcactcagcacatatttgag
gaagacccgagcgtactgtacatctccctgcaccgctatgatcatggcaccttctttccc
atgggggatgagggtgccagctgccagacgggccgggctgcgggcactggcttcactgtc
aacgtagcgtggaatgggccccgtgtgggcgacgccgactacctggctgcttggcatcgt
ctggtgctccctattgcctacgagtttaacccggaactggtgctggtctcagctggcttt
gacgccgcacggggcgacccactggggggctgccaggtgtcgcccgagggctatgcccac
ctcacccacctgctgatgggccttgccaacggccgcatcatcttaatccttgagggtggc
tataacctgacatccatctcggagtccatggctgcctgcacccgttccctccttggggac
ccgccaccactgttaaacctgtcacggcccccactctcaggggccctggcctccatcact
gagaccatccacatccatcgcagatactggcgcagcttgcgggtcatgaaggttgaagac
aaggagggaccctccagttctaagtctatcaccaagaaggtgacccagccagccaaccgt
gggtcaggtgtggggatgaccgcaccagatgggaacattccggatgcagacgcagggaag
cctacctcagcatcacccgtggcagcatccactccagaccaagctaagtcagagaccact
gtagtggagttcagccgggaccaaatctcggaggctcccaccggggaagacaccgcggac
cagaccccctcagaggcagccacaggagaggctgcggtggaccagactccttcagaggca
gccacggaaggagccacacaggaccagaccccctcagaggaagctgtggggggagctgag
atgatccaaacccctccagccttatgtactgacaaccagactcctccagccttgcctgcg
caaggagcgacaacccaaataccccccagtaagctgacggagaatctcaggaacttggac
ctaaacagcgaggctcaggaggcagcagactctcagatcccggaagacgagaggctgcta
ggagaggcagcaggaggtcaggacagggatgcttccgggctgactcagagctttgaggag
catgctgacgctgaccaggtcatgctttatgccgtgacaccgctgccctggtgtccccat
ttggtggcagtacgtcctgtccctgaatcgggcctggacgtgacccagccttgtcgggac
tgtggaaccctccaggagaactgggtgtgtctgtcttgctatcaggtctactgtggccgt
tacgtcggtgcccatatgctccaacaccatgaagtctcaggacacccgctggtcctcagc
tacgtcgacctatctacctggtgttacaactgtgaggcctatgtccaccaccaggtgggc
tctcctggatgtgaagaacgctgctcaccagaacaagtttggggagcacatacctcactc
actctaaatgtcagaatgtgctccccttctccgtcttctgaggacctggatgaagggcag
cgtcactccatcccatcgggaagacacttttcacctccccaagggtgccaatttcagcat
aaatactttgtaagaggactgtga
DBGET
integrated database retrieval system
