Martes martes (European pine marten): 308338568
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Entry
308338568 CDS
T12008
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform 1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
mmaq Martes martes (European pine marten)
Pathway
mmaq04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mmaq00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
308338568 (SMARCAD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmaq03036
]
308338568 (SMARCAD1)
Chromosome and associated proteins [BR:
mmaq03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
308338568 (SMARCAD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
308338568
NCBI-ProteinID:
XP_080652901
LinkDB
All DBs
Position
2:95549559..95627124
Genome browser
AA seq
1028 aa
AA seq
DB search
MNLFNLDRFRFEKRSKIEEVPEATPQPTQPGPSSPISLSAEEENAEGEVSRAGTPDSDIT
EKTEDSSVPETTENERKASISYFKNQRGIQYIDLSSDSEDIISPNCSSTVQEKKFNKDTV
IIVSEPSEDEESQGLPTMAGRNTDDISELEDLSELEDLKDAKLQTLKELFPQRSDSDLLK
LIESTSTMDGAIAAALLMFGDAEGGGPRKRKLSSSSEPYEEDEFNDDQSIKKKRLDHGEE
SNESAESSNNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDM
QYASQSEFPNGKEASSRSQNYPKNAAKTKLKQKCSMKPQNGFNKKRKKNVFNPKRVIEDS
EYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITEL
RPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTG
NGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAY
LYQEGNKGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYN
VIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGT
PVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPF
ILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNMEKNTEMCNVMMQL
RKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYR
HINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYL
RLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ
AEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEGDEGSMPADIAT
LLKTSMGL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacttggaccgttttcgctttgagaaaaggagtaagattgaggaagtg
cccgaagcaacccctcaacccacccagcctggcccttcttcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaagttagcagggcaggcacacctgattcagatataact
gaaaaaacagaagattctagtgttccagaaactacagaaaatgaaagaaaagctagtata
tcatatttcaagaatcaaagaggaatacagtatattgatttgtcttctgatagtgaagat
atcatttccccaaattgctccagtacagttcaagagaaaaaattcaacaaagacacggtg
attatagtttctgagccatctgaagatgaagagtcccagggccttcctacaatggcaggt
agaaatactgatgatatctcggaattggaagacctttcggaattggaagaccttaaagat
gctaaacttcagaccttgaaggaacttttcccacagagaagtgacagtgatttacttaag
ttgattgaatcaacaagcactatggatggagcaatcgctgccgccttgctgatgtttggt
gatgcagaaggtggtggacccaggaaaagaaaattatcttcttcttcagagccatatgag
gaagatgaatttaatgatgatcagtctataaaaaagaaaagactggatcatggagaagaa
tccaatgagtctgcagaatctagtaataattgggaaaagcaagaaagcattgtattaaaa
ttgcaaaaggaatttcccaattttgataaacaggaactaagggaagtactgaaggaacat
gaatggatgtacacagaagcattagaatctttaaaagtgtttgcagaagaccaagatatg
caatatgcttcacaaagtgaatttccaaatggaaaagaagcttcttcaagaagtcagaat
taccctaaaaatgcagctaaaacaaaactaaaacagaagtgttccatgaaaccacaaaat
ggttttaacaagaaacgtaaaaaaaatgtatttaatcctaagagagttattgaagactct
gaatacgattcaggctctgatgtgggtagttcactagatgaggactatagtagtggtgaa
gaagtgatggaggatggctataagggtaaaattcttcactttcttcaagacgcttcaatt
ggtgaacttactttgattcctcagtgttctcagaagaaggctcagaagattacagaactc
cggccctttaatagttgggaagctctgttcacaaagatgtccaaaactaatggcttatca
gaagatttgatatggcattgtaaaacactgatccaagaaagggatgtagttataagactt
atgaacaaatgtgaagacatttcaaataaattgacaaaacaagttaccatgctcactgga
aatggaggtggatggaacattgaacaaccctccattctgaaccagagtttatcactcaag
ccctatcagaaggttggtttgaattggctggcattggtacataaacatggacttaatggc
attttggcagatgaaatgggcctaggaaaaactattcaagccattgcattcctggcatac
ctctatcaggagggtaataaaggtcctcatttgatcgttgttccagcgtcaactatagat
aactggttaagagaagttaatttatggtgccccactttaaaggtgctctgttactatggc
tctcaagaagaacgtaaacagattagatataacatccatagtaaatatgaagaatataat
gtaattgtgaccacatataattgtgcaatcagcagttctgatgatcgtagtctgtttcga
cggctgaaacttaattatgcgatttttgatgagggccatatgctaaagaatatgggctcc
atccgctaccagcaccttatgacaattaatgcaaataaccgtttgctgctcacaggcaca
cctgtacagaataatctgttagaactcatgtcactgttgaattttgttatgccacacatg
tttagtagtagcaccagtgaaatacgaagaatgttttcttctaaaacaaaatcagcagat
gagcaaagtatatatgaaaaagagagaatagcacacgcgaaacaaattataaaaccattt
attctcagaagggtaaaagaagaggttctcaagcagctaccccccaagaaagatcgaatt
gaattgtgtgcaatgtcagagaaacaggagcagctctatttgggtcttttcaacagattg
aaaaaatctatcaataacatggaaaaaaacacagaaatgtgcaatgtcatgatgcaatta
agaaaaatggccaatcatcctttattacatcgccaatattacacagctgaaaagctcaag
gaaatgtctcagcttatgctaaaggaacctacacattgtgaggctaatcctgacttgatc
tttgaagatatggaagttatgacagactttgaattacatgtactttgtaaacaatatcga
catattaataacttccagttagacatggacttgattttagattctggaaaattccgagtt
ttaggatgcatcttgtctgaattgaaacagaagggtgatagagttgtattatttagccaa
tttaccatgatgctggatattttagaggttctcttaaaacatcatcagcataggtacctc
agattagatgggaagactcagatttctgaaaggattcacctaattgacgagtttaatacc
gatatggatatctttgtgtttctgctgtcaacaaaagctggtggcttaggaataaacctc
acttcagcgaatgttgttatacttcatgatattgactgtaacccatataatgacaaacaa
gcagaagacagatgccacagagtaggccagactaaagaagtactagttataaaattaata
agccaagggacaattgaagaatccatgctaaaaattaaccaacagaaattgaaacttgaa
caagatatgaccacagtcgatgaaggtgacgaagggagtatgccagcagatatagccaca
ttactaaaaacgtcaatgggcctgtga
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