Martes martes (European pine marten): 308340095
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Entry
308340095 CDS
T12008
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
mmaq Martes martes (European pine marten)
Brite
KEGG Orthology (KO) [BR:
mmaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmaq03000
]
308340095 (SOX1)
Transcription factors [BR:
mmaq03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
308340095 (SOX1)
SSDB
Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
308340095
NCBI-ProteinID:
XP_080655388
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All DBs
Position
3:complement(<1464893..>1466083)
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AA seq
396 aa
AA seq
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MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGGGGGGVAKANQDRVKRPM
NAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEH
PDYKYRPRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGG
AAGGGYAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHH
PHAHPHNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNS
AVAAAAAAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGESGD
PAAAAAAAAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcactcgcctggcggcgcccaggcccccacg
aacctgtcgggcccggccggggcgggcggcggcggcggcggcggcggcgggggcggcggc
ggcggcggcggcggcggcggggtcgccaaggccaaccaggaccgggtcaagcggcccatg
aacgccttcatggtgtggtcccgcgggcagcggcgcaagatggcccaggagaaccccaag
atgcacaactctgagatcagcaagcgcctgggcgccgagtggaaggtcatgtccgaggcc
gagaagcggccgttcatcgacgaggccaagcggctgcgcgcgctgcacatgaaggagcac
ccggattacaagtaccggccgcgccgcaagaccaagacgctgctcaagaaggacaagtac
tcgctggccggcgggctgctggcggccggcgcgggcggcggcggcgcggccgtggccatg
ggcgtgggcgtgggcgtgggcgcggcggccgtgggccagcgcctcgagagcccgggcggc
gcggcgggcggcggctacgcgcacgtcaacggctgggccaacggcgcctaccccggctcg
gtggcggcggcggcggcggccgcggccatgatgcaggaggcgcagctggcctacgggcag
cacccgggcgcgggcggcgcgcacccgcacgcgcacccggcgcacccgcacccgcaccac
ccgcacgcgcacccgcacaacccgcagcccatgcaccgctacgacatgggcgcgctgcag
tacagccccatctccaactcgcagggctacatgagcgcctcgccctcgggctacggcggc
ctcccctacggcgccgcggccgccgccgccgccgccgcgggcggcgcgcaccagaactcg
gccgtggcggcggcggcggcggcggcggccgcgtcgtcgggcgccctgggcgcgctgggc
tcgctcgtcaagtcggagccgagcggcagcccgcccgcgcccgcgcactcgcgggcgccg
tgccccggggacctgcgcgaaatgatcagcatgtacttgcccgccggcgagagcggagac
ccggcggcggccgcggcggccgcggcgcagagccggctgcactcgctgccgcagcactac
cagggcgcgggcgcgggcgtcaacggcacggtgcccctgacgcacatttag
DBGET
integrated database retrieval system
