Martes martes (European pine marten): 308344132
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Entry
308344132 CDS
T12008
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform 1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
mmaq Martes martes (European pine marten)
Pathway
mmaq03082
ATP-dependent chromatin remodeling
mmaq04714
Thermogenesis
mmaq05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mmaq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
308344132 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
308344132 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
308344132 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmaq03000
]
308344132 (ARID1B)
03021 Transcription machinery [BR:
mmaq03021
]
308344132 (ARID1B)
03036 Chromosome and associated proteins [BR:
mmaq03036
]
308344132 (ARID1B)
Transcription factors [BR:
mmaq03000
]
Eukaryotic type
Helix-turn-helix
ARID
308344132 (ARID1B)
Transcription machinery [BR:
mmaq03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
308344132 (ARID1B)
Chromosome and associated proteins [BR:
mmaq03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
308344132 (ARID1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
TFIIA
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
308344132
NCBI-ProteinID:
XP_080661693
LinkDB
All DBs
Position
6:complement(10152657..>10592427)
Genome browser
AA seq
2462 aa
AA seq
DB search
MAARAAAAAAAAARARAGSGERRAPPGPRPAPGARDLEAGARGAAAAAPGPMLGGGGDGG
GLNNVHHHPLHPRHELNMAHNASTAAAAASTNSAKSGGSEAALKEGGSAAALSSSSSAAA
AASSSSSSSGPGSVMETGLLPNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHH
HALQQQLNQFQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHPISNNNSLG
GAGGGAAQPGPDMEQPQHGGAKDSAAGSQADPPGQPLLSKPGDEDDAPPKMGEPAGGRFE
HPGLGALGAQQPPVAVPGGGGGGGGGGGSSGPAAVSEFNNYYGSAAPASGGPGGRTGPCF
DQHGGQQSPGMGMMHSASAATGAPNSMDPLQNSHEGYPNSQYNHYPGYSRPSAGGGGGGG
GGGGGGGGGGGGGSGGGGGGGGGAGAGAVAAAAAAAAAAAAAGGGGGGGGGYGGSSSGYG
VLSSPRQQGGGMMMGPGGGGAASLSKAAAGAAAGGFQRFAGQNQHPSGATPTLNQLLTSP
SPMMRSYGGSYPDYSSPSAPPPPPPSQPQSQAAAAAAGAAAGGQQAAAGMGLGKDMGAQY
AAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSS
PYPGGSYGPPGPQRYPISIQGRTPGAMGGMQYPQQQMPPQYGQQGVSAYCQQGQQPFYNQ
QPPPPHLPPQAQYLPAQAQQRYPPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPS
SLPVEVLTSEDTAFGLKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSP
HASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSPHPALS
QSPMSQERGFMAGTQRNPQMSQYGPQQTGPPMSPHPSPGGQMHPGISSFQQSNSSGTYGP
QMSQYGPQGNYSRPPTYSGVPSASYSGPGPGMGINANNQMHGQGPSQPCGAMPLGRMPSA
GMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRPP
YIRSPAYPSQSGAGGRPMFSSQHPNYGNSQAPMMHQPDQYGQGSFPGMNQSGLMASSSPY
SQPVNNSSGLMNTQAPPYSMTPNMVNSSAASMGLADMMSPGDSKLPVPLKADGKEEGAPQ
PESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGWPKTPSSPK
SSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVC
VKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEV
FSTADTKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPM
QGGRSSTVSVHDPFSDAGDSFPKRNSMTPSAPYQQGMGMPDVMGRMPYEPNKDPFGGMRK
VPGSSEPFMTQGQMPTSSMQDMYNQSPSGAMSSLGMGQRQQFPYGAGYDRRHEPYGQQYP
GQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGDVYNMQYGSQQQELYNQY
GGSYSGPDRRPMQGQYPYPYTRERMQGPAQVQPHAIPPQMMGGPMQSSSSEGPQQSMWAT
RNDLPYPYQSRQGPGGPGQAPPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSPA
SMQPITRPPQSSYQTPPSLPNHVSRAPSPASFQRSLESRMSPSKSPFLPSLKMQKVLPTV
PTAQVTGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGL
LAESTWALDTINILLYDDSTVATFSLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPS
QKALDHNAVKRDDSQSWADDSGKEEEDAECVDEEEDDEEDEDDDSGKTETEEKSGVALAS
PNAPADAKEKPRQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEFNSGLLHWQLGGGDTT
EHIQTHFESKMEIPPRRRPPPPVSSTGRKKEQEGRGEADEQQEKSIIATIDDVLSARPGA
LPEDANPGTQTESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCIC
VSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVAC
SKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPF
PTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVC
REMSMALLSNLAQGDALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLLHMQPPPL
EPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIG
QL
NT seq
7389 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgggcagcagcggcggcggcggcggcggcgcgggcgcgggcgggcagcggc
gagcggcgggcgccccccgggccgcggccggcgcccggggcccgggacctggaggcgggg
gcgcgcggcgcggcggcggcggcaccgggacccatgctggggggcggcggcgacggcggc
ggcctgaataatgtgcaccaccaccccctgcacccccgtcacgaactgaacatggcccat
aacgcgagcacggcggccgccgccgccagcacgaacagcgccaagagcggcggctccgag
gcggctctcaaggagggtggaagcgccgccgcgctgtcctcctcctcctccgcggcggcg
gcggcgtcctcctcttcctcctcgtcgggcccgggctcggttatggagacggggctgctc
cccaaccacaaactgaaaaccgttggcgaagcccccgccgcaccgccccaccagcagcac
caccaccaccaccatgcccaccaccaccaccaccatgcccaccacctccaccaccaccac
cacgcactacagcagcagctaaaccagttccagcagcagcagcagcagcagcagcagcag
cagcagcagcagcagcagcaacaacaacaacaacaacaacagcagcagcagcagcagcag
cagcagcagcagcaacagcagcagcagcaacatcccatttccaacaacaacagcctcggc
ggcgcgggcggcggcgcggctcagccgggtcccgatatggagcagccgcaacatggaggc
gccaaggacagtgccgcgggcagccaggccgaccccccgggccagcctctgctgagcaag
ccgggcgacgaggacgacgcgccgcccaagatgggggagccggcgggcggccggttcgag
cacccgggcctgggcgccctgggcgcgcagcagccgccggtcgccgtgcccgggggcggc
ggcggcggcggtggcggcggcggcagcagcggcccggccgccgtctcggagtttaataat
tactatggcagcgctgcccctgctagcggcggccccggcggccgcactgggccttgcttt
gatcaacatggcggacaacaaagccccgggatggggatgatgcactccgcctcagccgcc
accggagcccccaacagcatggaccccctgcagaactcccacgaagggtaccccaacagc
cagtacaaccattatccgggctacagcaggcccagcgcgggcggcggcggcggcggcggc
ggcggcggcggtggcggaggaggaggaggaggaggaggcagcggaggaggaggaggagga
ggaggaggagcaggagcgggagctgtggcggcggcggccgcggcggcggcggcagcagca
gcagcaggaggcggcggcggcggcggcggcggctatgggggctcgtcctcggggtacggg
gtgctgagctccccccggcagcagggcggcggcatgatgatgggccccgggggcggcggg
gccgcgagcctcagcaaggcggccgccggcgcagcggctgggggcttccagcgcttcgcc
gggcagaaccagcacccgtcgggggccaccccgaccctcaaccagctgctcacctcgccc
agccccatgatgaggagctacggcggcagctaccccgactacagcagccccagcgcgcca
ccgccgccgccgccgtcgcagccccagtcccaggcggcggcggcggcggcgggggcggcg
gcgggcggccagcaggcggccgcgggcatgggcttgggcaaggacatgggcgcccagtac
gccgctgccagcccggcctgggcggccgcgcaacaaaggagccacccggcgatgagcccc
ggcacccccggcccgaccatgggcagatcccagggcagcccaatggatcccatggtgatg
aagagacctcagttgtacgggatgggcagtaaccctcattctcagcctcagcagagcagc
ccttacccaggaggctcctacggccccccaggcccacagcggtatccaatcagcatccag
ggtcggaccccaggggccatgggaggaatgcagtacccacagcaacagatgccccctcag
tacggacagcagggggtgagcgcctactgccagcagggccagcagcctttctacaaccag
cagccgccgcctccgcacctccccccgcaggcccagtacctgccggcccaggcccagcag
aggtacccgccgcagcaggacatgtctcaggaaggctatggaactaggtctcaacctcct
ttggctcctggaaaacctaaccatgaagacttgaacttgatacaacaagaaagaccgtca
agtttaccagttgaagtcttgacctcggaggataccgcctttggactcaaggacctgtct
ggctccatcgatgacctccccacgggaacggaggcaactctgagctcagcagtcagtgcg
tctggatccacgagcagccaaggggatcagagcaacccggctcagtcacctttctctcca
cacgcatccccccatctctccagcatccccgggggcccatcgccttctcccgtcggctcg
cctgtgggcagcaaccagtcccgatccggcccgatttctcctgctagtattccaggcagt
cagatgcctcctcagccacccgggagccagtcagaatccagcccccatcctgccttgagc
cagtcaccaatgtcacaggaaagaggttttatggcaggcacacaaagaaacccccagatg
tctcagtatggacctcaacagacaggaccacccatgtcgcctcatccttctcctggaggc
cagatgcatcccggaatcagtagctttcagcagagtaactcaagtgggacttacggtcca
cagatgagccagtatggaccacaaggtaactactccagacccccaacgtatagcggggtg
cccagtgcaagctacagcggcccggggcccggcatgggcatcaatgccaacaaccagatg
catggacaagggccaagccagccatgtggtgctatgcccctgggacgaatgccatcagct
gggatgcagaacagaccatttcctggaaatatgagcagcatgacccccagttctcctggc
atgtctcagcagggagggccaggaatggggccgccgatgccaaccgtgaaccgtaaggca
caggaggcagccgccgcagtgatgcaggccgctgcaaactcggcccagagcaggccacca
tacattaggtcgcctgcttatcccagccagtctggggctgggggacgccccatgttttct
tcccagcaccccaactatggcaactcccaggctcccatgatgcaccagcctgaccagtac
gggcaaggcagttttcccggcatgaatcagagtggacttatggcttccagctctccctac
agccagcctgtgaacaacagctctgggctgatgaacacccaggcacccccctacagcatg
acgcccaacatggtgaacagctcagcagcatctatgggtcttgcagatatgatgtctccc
ggggactccaagctgcccgtgcccctcaaggccgacgggaaagaagaaggcgctccgcag
cccgagagcaagtcgaaggatagctacagctctcagggtatttctcagcccccaaccccc
ggcaacctgccagtcccttccccaatgtcccccagctctgctagcatctcctcatttcat
ggagatgaaagcgatagcattagcagcccaggctggccaaagactccatcaagccctaag
tccagctcttccaccaccactggggaaaagatcacaaaggtgtatgaattggggaatgag
ccagagagaaagctatgggtcgacagatacctcaccttcatggaagagagaggctcgccc
gtctcgagtttgcccgccgtgggcaagaagcccttggacctgttccggctctacgtctgc
gtcaaagagatcggaggtttggcacaggttaataaaaacaagaagtggcgcgagctggca
accaacctaaatgttggcacttcaagcagcgcggcgagctccctgaaaaagcagtatatt
cagtacctgtttgcctttgagtgcaagatagagcgcggggaggagcccccgccggaagtc
ttcagcacggccgacaccaagaagcagcccaagctccagccgccctctcctgctaactca
ggatccttgcaaggtccacagaccccccagtccactggcagtaactcgatggcagaagtt
ccaggtgacctgaagcccccgaccccagcctccacccctcatggacagatgaccccgatg
caaggtggaaggagcagtacggtcagcgtgcacgacccgttctcagacgccggcgactcg
ttcccgaagcggaactccatgactccgagcgccccctaccagcagggcatgggcatgcct
gacgtgatgggaaggatgccctacgaacccaacaaggacccctttggtggaatgagaaaa
gtgcctggaagtagtgagccctttatgactcaaggacagatgcccactagcagtatgcag
gacatgtataaccaaagtccctctggagcgatgtccagtctgggcatggggcagcggcag
cagtttccctacggagccggttacgatcgaaggcatgaaccttatgggcagcagtaccca
ggccaaggccctccctcaggacagccgccatatggaggacaccagcccggcctgtatccg
cagcagccgaattacaaacgccatatggacggcatgtacgggcctccagccaagcggcac
gagggagacgtgtacaacatgcagtacggcagccagcagcaggagctgtacaaccagtac
gggggctcctactcgggcccggacaggaggcccatgcagggccagtacccgtacccctac
accagggagcggatgcagggcccggcgcaggtgcagccgcacgccatcccgcctcagatg
atgggcggcccgatgcagtcgtcctccagcgaggggccgcagcagagcatgtgggcgacg
cgcaacgacctgccttacccctaccagagccggcagggccccggcggccccggccaggcg
ccgccctacccaggcatgaaccgcacggatgatatgatggtacctgatcaaaggatcaac
cacgagagccagtggccttctcacgtcagccaacgtcagccttatatgtcctctcccgcc
tccatgcagcccatcacgcgcccgcctcagtcatcctaccagacgccgccgtcactgcca
aaccacgtctccagagcccccagccccgcctccttccagcgctccctggagagccgcatg
tcccccagcaagtctccctttctgccctctctgaagatgcagaaggtcctgcccaccgtc
cccacggcccaggtcacggggccgcccccgcagccgccccccatccgaagggagatcacc
tttccccctggctccgtcgaggcatcgcagccagtcttgaaacaaaggcgaaagattacc
tcaaaagatatcgttactcctgaggcctggcgtgtgatgatgtcccttaagtcaggtctt
ctggctgaaagtacttgggctctggacactattaatattctcctgtatgatgacagcact
gtcgctaccttcagtctttcccagttgtccggatttctcgaacttttagtagagtacttt
agaaaatgcctaattgacatttttgggattcttatggaatatgaggtgggcgaccccagc
caaaaagcacttgaccacaatgcggtgaagagagacgacagccagtcgtgggccgacgat
tctgggaaagaggaggaagatgccgagtgtgtcgatgaggaggaggacgacgaggaggac
gaggacgacgacagtgggaagacagagacggaggagaagagcggcgtggctctggcctct
cccaacgcccccgcagatgccaaggagaagcccaggcaagcgagtaagttcgacaagctg
ccgataaagatagtcaagaagaacaacctgttcgtggtcgaccggtccgacaagctgggc
cgtgttcaggagttcaacagcggacttctgcactggcagctcggcgggggggacaccacc
gagcacatccagactcactttgagagcaagatggaaatccctcctcggaggcgtccgcca
ccccccgtgagctccacgggtaggaagaaagagcaggaaggcagaggcgaggctgacgag
cagcaggagaagagcatcatcgcgaccatcgacgacgtcctgtccgcccggccgggggcg
ctgccggaagacgcgaaccccggtacccagaccgagagcagcaagtttcccttcgggatc
caccaagccaaaagtcaccggaacatcaagctgctggaggacgagccacggagccgagac
gagactcctctctgcaccatcgcgcactggcaggattctctggccaagcgctgtatctgt
gtgtcgaatattgtccgtagcttgtcttttgtgcctggcaacgacgccgaaatgtccaaa
catccaggcttggtgctgatcctggggaagctgatccttcttcaccacgagcatccagag
agaaaacgagcgccgcagacctacgagaaagaggaagacgaggacaagggggtggcctgc
agcaaggatgagtggtggtgggactgcctggaggtcttaagggataacacgttggtcacg
ttggccaacatttccgggcagctagacttgtctgcttacacagaaagcatctgcttgccg
attttggatggcttgctgcactggatggtttgcccgtcggcagaggcacaagaccccttt
cccacggtgggacccaactctgtcctgtcgcctcagagactcgtgctggagaccctctgc
aaactcagcatccaggacaataacgtggacctgatcttggccacgcctccatttagtcgt
caggagaaattctatgctacgttagttaggtacgtgggagatcgcaaaaacccagtctgt
cgagaaatgtccatggcgctcttatcgaacctggcccaaggggacgcgctggcagcacgg
gcaatagctgtgcagaaagggagcattggaaacttgataagcttcctagaggacggtgtc
accatggcccagtaccagcagagccagcacaacctcctgcacatgcagcccccgcctcta
gaaccgccgagcgtggacatgatgtgcagggcggccaaggctctgctggccatggccagg
gtggacgagaaccgctcagagttcctcctgcacgagggccggttgctggacatctcgata
tccgccgtcctgaactctctggtcgcgtctgtcatctgtgacgtactgtttcagatcggg
cagttatga
DBGET
integrated database retrieval system
