Martes martes (European pine marten): 308349948
Help
Entry
308349948 CDS
T12008
Symbol
SCN5A
Name
(RefSeq) sodium channel protein type 5 subunit alpha
KO
K04838
voltage-gated sodium channel type V alpha
Organism
mmaq Martes martes (European pine marten)
Pathway
mmaq04261
Adrenergic signaling in cardiomyocytes
mmaq04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mmaq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
308349948 (SCN5A)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
308349948 (SCN5A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmaq04040
]
308349948 (SCN5A)
Ion channels [BR:
mmaq04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
308349948 (SCN5A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
CcmD_alt
FraC
Motif
Other DBs
NCBI-GeneID:
308349948
NCBI-ProteinID:
XP_080671027
LinkDB
All DBs
Position
1:149920714..150015340
Genome browser
AA seq
2018 aa
AA seq
DB search
MADFLLPRGTSSFRRFTRESLAAIEKRMAEKQARGSAASQESREGLPEEEPPRPQLDLQA
SKKLPDLYGNPPRELIGEPLEDLDPFYSTQKTFIVLNKGKTIFRFSATNALYVLSPFHPV
RRAAVKILVHSYPLHMLIMCTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILAR
GFCLHAFTFLRDPWNWLDFSVIVMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTI
VGALIQSVKKLADVMVLTVFCLSVFALIGLQLFMGNLRHKCVRNFTTLNDTNGSVEADGL
VWESLDLYLNDPGNYLLKNGTSDVLLCGNSSDAGTCPEGYRCLKAGDNPDHGYTSFDSFA
WAFLALFRLMTQDCWERLYQQTLRSAGKIYMIFFMLVIFLGSFYLVNLILAVVAMAYEEQ
NQATIAETEEKEKRFQEAMEMLKKEHEALTIRGVDTVSRSSLEMSPLAPVSTHERRSKRR
KRLSSGTEECGDDRFPKSDSEDGPRAMNRLSSAHGLSRTSMKPRSSRGSIFTFRRRDLGS
ETDFADDENSTAGDSESHRTSLLVPWPLRRPSAQGQLSPGTSALSHALNGKRNSTVDCNG
VVSLLGAGDPEATSPGSHLLRPVILDRPPDTTTPSEELARPQMLNRQAPCMDGFEEPGER
QRALSAVSVLTSALEELEESHRKCPPCWHRFAQRYLIWECCPLWLSIKQKVKFMVMDPFA
DLTITMCIVLNTLFMALEHYNMTTEFEEMLQVGNLVFTGIFTAEMTFKIIALDPYYYFQQ
GWNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGAL
GNLTLVLAIIVFIFAVVGMQLFGKNYSEQRYRISDSGLLPRWHMMDFFHAFLIIFRILCG
EWIETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLTAPDDDGEMN
NLQLALARIQRGLRFLKRTTWDFCCGLLQRRPQKPATLASHGQLPSCMATSSPPPPPESE
KAPPARKETRFEEDERPGHGPPGDAEPVCVPIAVAESDTDDQEDDEENSLGTEEESSKQQ
ESQPVSGSPEALPEPRAWSQVSETPSSEASMAQADWRQRRKVESPAPGCSETHEDSYSEG
STADMTNTADLLEQIPDLGEDVKDPEDCFTEGCVRRCPCCTVDTTQGPGKVWWRLRKTCY
RIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLEMLLKWV
AYGFKKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEG
MRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNYTIVN
NKSDCESFNVTGELYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRGYEEQPQ
WEYNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKMRGQDIFMTEEQKKYYNAMK
KLGSKKPQKPIPRPLNKYQGFLFDIVTKQAFDVTIMFLICLNMVTMMVETDDQSPEKVNI
LAKINLLFVAIFTGECIIKMAALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSP
TLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANF
AYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNLPNSNGSR
GNCGSPAVGILFFTTYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFDMFYEIWE
KFDPEATQFIEYSALSDFADALSEPLRIAKPNQINLINMDLPMVSGDRIHCMDILFAFTK
RVLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKHEEVSATIIQRAFRRHLLQR
SMKHASFLFRQQAGSSGLSDEDAPEQEGLIAYMMNENFSQRLGPPSSSSISSTSFPPSYD
SVTRATSDNPQVRVSDYSHSEDLADFPPSPDRDRESIV
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttcctgttacctcggggcaccagcagcttccgcaggttcacccgggagtcc
ctggcggccatcgagaaacgcatggcggagaagcaggcccgaggctcggccgcctcacag
gagagccgagaagggctgcccgaggaggagcctccccggccccagctggacctgcaggcc
tccaaaaagctgccagatctctatggcaacccgccccgagagctcatcggggagcccctg
gaggacctggaccccttctatagcacccaaaagaccttcatcgtgctgaataaaggcaag
accatcttccggttcagtgccaccaatgccttgtatgtcctcagtcccttccaccctgtc
cggagagcggctgtgaagattctggttcattcatatcctttgcatatgcttatcatgtgt
accatcctgaccaactgcgtgttcatggcccagcacgaccctccaccctggaccaagtat
gtcgagtacaccttcactgccatttacacctttgagtctcttgtcaagattctggctcga
ggcttttgcctgcatgctttcaccttcctccgggacccgtggaactggctagacttcagt
gtgatcgtcatggcatacacaactgaatttgtggacctgggcaatgtctcagctttacgt
accttccgagtcctccgggccctgaaaactatatcagtcatttcaggtctgaagaccatc
gtgggcgccctgatccagtctgtgaagaaactggctgatgtgatggtcctcacggtcttc
tgcctcagcgtcttcgccctcatcggcctgcagctcttcatgggcaacctcaggcacaag
tgtgtccgaaacttcacaacgctcaatgacaccaacggctctgtggaggccgatggccta
gtctgggagtcactggacctctacctcaacgacccaggaaattacttgctgaagaatggc
acctctgacgtgttactgtgtgggaacagctctgatgccgggacatgtcctgagggttac
cggtgcctaaaggcaggggacaaccctgaccatggttacaccagctttgactccttcgcc
tgggcgttccttgcactcttccgcctaatgactcaggactgctgggagcgcctctaccaa
cagaccctgaggtctgcagggaagatctacatgatcttcttcatgcttgtcatcttcctg
ggctccttctacctggtgaacctgatcctggctgtggttgccatggcctacgaggagcaa
aaccaagccaccatcgctgagaccgaggaaaaagaaaagcgcttccaggaggccatggag
atgctcaagaaagagcatgaggccctcaccatcaggggtgtggacaccgtgtcccgcagc
tccttggagatgtcccctttagccccagtaagcacccacgagagaagaagcaagaggaga
aaacgactgtcttcggggacagaggagtgtggggatgacaggttccccaagtccgactca
gaggatggtcccagagcaatgaatcgtctgagcagcgcacatggcctcagcaggacgtcc
atgaaaccgcgctccagccgcgggagcattttcacctttcgcaggcgagacctgggctca
gagacagattttgcagatgatgaaaacagtacagcgggggacagcgagagccaccgcacg
tcactgctggtgccctggcctttgcgccggcctagtgcccagggacagctcagtccgggg
acttcggctctcagtcacgccctcaatggtaaaaggaacagcaccgtggactgcaacggg
gtggtctccttgctgggggcaggagaccctgaggctacctccccagggagccacctcctc
cgccctgtgatcctggatcgccccccagacacgaccacaccgtcggaggagctggcccgg
ccccagatgctgaaccgccaggctccatgcatggatggcttcgaggagccaggagagcgg
cagcgggccctcagcgcagtcagtgtcctcaccagcgccctggaagagctggaagagtcc
caccgcaagtgtccgccatgctggcatcgctttgcccagcgctacctgatctgggagtgc
tgcccgctgtggctgtccatcaagcagaaagtgaagttcatggtcatggacccattcgct
gacctcaccatcaccatgtgcatcgtgcttaacacactcttcatggctctggagcactac
aacatgacaaccgaattcgaggagatgctgcaggttggaaacctggtcttcacggggatc
ttcaccgcagagatgaccttcaagatcatcgctctggacccctactactacttccagcag
ggctggaacatcttcgacagcatcattgtcatcctgagccttatggagctgggcctgtcc
cgcatgggcaacctgtcagtgctgcgttccttccgcctgctgcgggtcttcaagctggcc
aaatcatggcccaccctgaacaccctcatcaagatcatcggaaactcggtgggggcactg
gggaacctgacgctggtgctggccatcatcgtgttcatcttcgctgtggtgggcatgcag
ctcttcggcaagaactactctgagcagaggtaccgcatcagtgactcaggcctgctgccc
cgctggcacatgatggacttcttccatgcctttctcatcatcttccgcatcctctgtggg
gagtggatcgagaccatgtgggactgcatggaggtgtctgggcagtcactgtgcctgctc
gtctttttgcttgttatggttattggcaacctcgtggtcctgaacctcttcctggctctg
ctgctcagctccttcagcgcagacaacctcacagcccctgatgatgacggggagatgaac
aacctccagctagccctggcacgtatccagcgcggcctgcgcttcctcaagcggaccacc
tgggacttctgctgtgggctcctccagcggcggccccagaagcccgcaaccctcgccagc
cacggccagctgcccagctgcatggccacctccagccccccaccacccccggagtcagag
aaggcgcctccggcccgcaaggagacgcggtttgaggaagatgagcggccaggccacggc
ccccccggggatgcagagcctgtgtgtgtgcccattgctgtggctgagtcagacacagat
gaccaagaggacgatgaggagaacagcctgggcacggaggaggagtccagtaagcagcag
gaatcccagcctgtttccggcagcccagaggccctcccagagcccagggcctggagccag
gtgtcagagaccccctcctccgaggccagtatggctcaggcagactggcggcagcggcgg
aaagtggagtccccggccccagggtgcagtgagactcatgaggacagctactcagaggga
agcacagcagacatgaccaacactgctgacctcctggagcagatccccgacctgggtgag
gatgtcaaggatccggaagactgtttcactgaaggctgcgtccggcgctgtccttgctgc
accgtggacaccactcagggccccgggaaggtctggtggcgactgcgcaagacctgctac
cgcatcgtggagcacagctggttcgagacgttcatcatcttcatgatcctgctcagcagt
ggagccctggcctttgaggacatctacctggaggagcggaagaccatcaaggttctgctc
gagtatgccgacaagatgttcacctacgtctttgtgctggagatgctgctcaagtgggtg
gcctatggctttaagaagtacttcaccaacgcctggtgctggctggacttcctcatcgtg
gatgtctccctgatcagcctggtagccaacaccctgggctttgccgagatgggccccatc
aaatcgctgcggacgttgcgtgcgctccgacccctgcgagccctgtcacggtttgagggc
atgagggttgtggtcaatgcgctggtgggcgccatcccatccatcatgaatgtcctcctc
gtctgcctcatcttctggctcatcttcagcatcatgggcgtgaacctcttcgcggggaag
tttgggagatgcatcaaccagactgagggagacctacctttgaactacaccatcgtgaac
aacaagagcgactgtgagtctttcaacgtgactggcgaactgtactggaccaaggtgaaa
gtcaactttgacaacgtgggggccgggtacctggcccttctgcaggtggcaacgtttaaa
ggttggatggacattatgtacgcagctgtggactccagggggtatgaagagcagccccag
tgggaatacaacctctacatgtatatctacttcgtcatcttcattatcttcgggtctttc
ttcaccctgaaccttttcatcggtgtcatcatcgacaacttcaaccaacagaagaaaaag
atgcggggccaggacatcttcatgacagaggagcagaagaagtactacaatgccatgaag
aagctgggctccaagaaaccccagaagcccatcccgaggcctctgaacaagtaccagggc
ttcctgttcgacattgtgactaagcaggccttcgatgtcaccatcatgtttctcatctgc
ttgaacatggtgaccatgatggtggagacagacgaccagagccccgagaaggtcaacatc
ttggccaagatcaacctgctctttgtagccatcttcacaggcgagtgtatcatcaagatg
gctgccctccgtcactattacttcaccaacagctggaacatctttgacttcgtggttgtc
atcctctccatagtgggtactgtgctctcagacatcatccagaagtacttcttctcccca
acactcttccgagtcatccgcctggcccgaatcggtcgcatcctcaggctgatccgaggg
gccaaggggatccgcacgctgctctttgccctcatgatgtccctgcctgccctcttcaac
atagggctgctgctcttccttgtcatgttcatctactccatcttcggcatggccaacttt
gcttatgtcaaatgggaggctggcatcgacgacatgttcaacttccagaccttcgccaac
agcatgctgtgcctcttccagatcaccacgtcagccggctgggatggcctcctcagccct
atcctcaacacaggacccccctactgcgaccccaacctgcccaacagcaacggctcccgg
ggcaactgtgggagtccggccgtgggcatcctcttcttcaccacatacatcatcatctcc
ttcctcatcgtggtcaacatgtacatcgctatcatcctggagaacttcagcgtggccacg
gaggagagcaccgagcctctgagcgaggatgacttcgacatgttctatgagatctgggag
aagttcgacccggaggccacccagttcatcgagtattcagccctgtctgactttgccgat
gccctgtctgagccgctgcgcatcgccaagcccaaccagataaacctcatcaatatggac
ctgcccatggtgagcggggaccggatccactgcatggacatcctctttgccttcaccaag
agggtcctgggtgagtctggggagatggatgccctgaagatccagatggaggagaagttc
atggcggccaacccgtccaagatctcctacgagcccatcaccaccacactccggcgcaag
cacgaagaggtgtcggccaccatcatccagcgggccttccggaggcacctgctgcagcgc
tccatgaagcacgcctccttcctcttccgccagcaggcgggcagcagtggcctctctgat
gaggatgcccccgagcaagagggcctcatcgcctacatgatgaacgagaacttctcccag
cgcctcggcccgccctccagctcctctatctcctccacatccttcccgccctcctacgac
agcgtcaccagggccaccagcgacaacccccaggtgcgggtgtccgactacagccacagc
gaggatctcgcggacttccccccctccccagacagggaccgcgagtccatcgtgtga
DBGET
integrated database retrieval system
