Martes martes (European pine marten): 308352580
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Entry
308352580 CDS
T12008
Symbol
LSM5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
mmaq Martes martes (European pine marten)
Pathway
mmaq03018
RNA degradation
mmaq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmaq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308352580 (LSM5)
09123 Folding, sorting and degradation
03018 RNA degradation
308352580 (LSM5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmaq03019
]
308352580 (LSM5)
03041 Spliceosome [BR:
mmaq03041
]
308352580 (LSM5)
Messenger RNA biogenesis [BR:
mmaq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
308352580 (LSM5)
mRNA degradation factors
5'-3' decay
Lsm complex
308352580 (LSM5)
Spliceosome [BR:
mmaq03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
308352580 (LSM5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM12_LSM
LSM14
Motif
Other DBs
NCBI-GeneID:
308352580
NCBI-ProteinID:
XP_080674966
LinkDB
All DBs
Position
11:complement(64342291..64345284)
Genome browser
AA seq
91 aa
AA seq
DB search
MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLVPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaacgctaccactaacccgtcgcagctgctgcctctagagcttgtggacaaa
tgtataggatcaagaattcacattgtgatgaagagtgataaagaaattgttggcacactt
ttgggatttgatgactttgtcaatatggtactggaggatgtcactgaatttgagatcaca
ccagaaggaagaaggatcactaaattagatcaaattttgctaaatggaaataatataaca
atgctggttcctggaggagaaggtcctgaagtatga
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integrated database retrieval system
