Martes martes (European pine marten): 308352756
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Entry
308352756 CDS
T12008
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
mmaq Martes martes (European pine marten)
Pathway
mmaq03018
RNA degradation
mmaq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmaq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308352756 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
308352756 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmaq03019
]
308352756 (LSM8)
03041 Spliceosome [BR:
mmaq03041
]
308352756 (LSM8)
Messenger RNA biogenesis [BR:
mmaq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
308352756 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
308352756 (LSM8)
Spliceosome [BR:
mmaq03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
308352756 (LSM8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
308352756
NCBI-ProteinID:
XP_080675238
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All DBs
Position
11:76759609..76766814
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AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgccttggaaaactacatcaaccgaactgttgcagttataacttctgacgga
agaatgatcgtgggaacactgaaagggtttgaccagaccattaatttgattttggatgaa
agccatgaacgagtgttcagctcttcacagggagtagaacaagtggtgctggggttatac
atcgtaagaggtgacaatgttgcagtcattggagaaattgatgaagagacagattctgca
cttgacttgggaaatattcgagcagaacctttaaactctgtagcacactga
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