Martes martes (European pine marten): 308353847
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Entry
308353847 CDS
T12008
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 isoform 1
KO
K13174
THO complex subunit 5
Organism
mmaq Martes martes (European pine marten)
Pathway
mmaq03013
Nucleocytoplasmic transport
mmaq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmaq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308353847 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
308353847 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmaq03019
]
308353847 (THOC5)
03041 Spliceosome [BR:
mmaq03041
]
308353847 (THOC5)
Messenger RNA biogenesis [BR:
mmaq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
308353847 (THOC5)
Spliceosome [BR:
mmaq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
308353847 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
308353847
NCBI-ProteinID:
XP_080677073
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All DBs
Position
13:70586125..70621079
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AA seq
694 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDVAVEIEDRRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSQPPRQDKTLSVA
IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
LDLKCKDDSMLHLTFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGDH
GKKTPNPANQYQFDKVGILTLRDYVLDLGHPYVWVQKLGGLHFPKEQPQHTVIADHSLSA
SHMETTMKLLKTRVQSRLALHKQFASLEHGIIPVTSDCQYLFPAKVVSRLVKWVTIAHED
YMELHFTKDIVEAGLAEDTNLYYMALVERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGE
KTNSNDDNIRAMESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLDVYLETDSHDDSVEGP
KEFPQEKMCLRLFRGPSRMKPFKYNYPQGFFSHR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatcgagcaaaaaacggaagcccaaagtgatccgaagtgatggagctcca
gctgaagggaagcgtaaccgttctgatacagagcaggaaggtaaatactacagtgaggag
gctgaagtggacctgcgggaccctggcagagactatgagctgtacaagtacacatgccag
gagttgcagagactcatggctgagatccaggacctgaagagcagaggaggcaaggatgtg
gcagttgagatagaagatcggaggatccagagctgtgtgcatttcatgaccctgaagaag
cttaatcgattagcccacatcaggttgaagaaaggaagagatcagacccatgaggccaag
cagaaagtagacgcttatcacctgcagctgcagaacctgttgtatgaggtgatgcacctg
cagaaagagatcaccaagtgtctggagttcaagtcgaagcatgaagaaattgatctggtc
agtttagaggagttttataaggaggctcctccagatattagcaaggctgaagtcaccatg
ggagaccctcaccagcaaacccttgcacgtctggactgggagctagaacagcgaaaaagg
ctggcagagaagtaccgagagtgcctgtccaacaaggagaagatccttaaggagattgag
gtcaagaaggagtacctaagcagcctccagcctcgcctcaatagcatcatgcaggcttcc
ctccccgtgcaagagtacctgttcatgccgttcgaccaggctcacaagcaatatgagaca
gctagacacttgccacctcccctctatgtcctctttgtccaagccactgcatatgggcag
gcctgtgctcatatgaaatcctcccagccccctagacaggataagacattgtctgtggca
atcgaaggcagtgtggacgaagccaaggctctgtttaagcctcccgaagactcccaagat
gatgagagcgactcagacgctgaggaggagcagaccacgaaacgccggcgacccacactg
ggagttcagttggatgacaaacgcaaggagatgctgaagaggcacccgctgtctgttatg
ctggacctgaagtgcaaagatgacagcatgcttcacctgactttctactacctcatgaac
ctcaacatcatgacagtgaaagccaaagtgacgactgccacggagttgatcacccccatc
agtgcaggtgacttgctgtctcctgactcagtcttgagctgtttgtatccaggagatcac
ggaaagaaaactccaaatccagccaatcagtatcagtttgataaagtcggcatcctgact
ttgagagactacgtacttgacctaggtcacccctatgtgtgggtacagaagctgggtggc
ctccacttccccaaagagcagccccagcacacggtgattgctgaccactcgctgagcgcc
agccacatggagaccaccatgaaactgctgaagaccagggtgcagtcccgtctggccctt
cacaaacagtttgcatccctggaacatggcatcataccagttactagtgattgccagtac
ctcttccctgcaaaggttgtctcccgactggtgaagtgggtgacgattgcccatgaggat
tacatggagctgcatttcaccaaggacattgtggaggcaggactggccgaggacacgaat
ctctactacatggcacttgtggaaaggggcacagccaaactccaggctgctgtggtgcta
aaccctggctactcctccatcccacctgttttccagctctgtctgaactggaaaggggag
aaaaccaatagcaacgatgacaacattcgggccatggagagcgaggtcaacgtttgctac
aaggagctatgcggtccccggcccagccatcagctcctgaccaaccagctgcagcgcctg
tgtgtgctgctagatgtctacttggagactgacagccatgacgacagtgtggaggggccc
aaggagtttccccaggagaagatgtgtctgcggcttttcaggggccccagcaggatgaag
ccgtttaaatataactatcctcaaggattcttcagccatcgctga
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integrated database retrieval system
