Martes martes (European pine marten): 308355895
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Entry
308355895 CDS
T12008
Symbol
TNN
Name
(RefSeq) tenascin-N isoform 1
KO
K06252
tenascin
Organism
mmaq Martes martes (European pine marten)
Pathway
mmaq04151
PI3K-Akt signaling pathway
mmaq04510
Focal adhesion
mmaq04512
ECM-receptor interaction
mmaq04518
Integrin signaling
mmaq05165
Human papillomavirus infection
mmaq05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
mmaq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
308355895 (TNN)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
308355895 (TNN)
04518 Integrin signaling
308355895 (TNN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
308355895 (TNN)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
308355895 (TNN)
09172 Infectious disease: viral
05165 Human papillomavirus infection
308355895 (TNN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mmaq00536
]
308355895 (TNN)
Glycosaminoglycan binding proteins [BR:
mmaq00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
308355895 (TNN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Fn3_PBP1
DUF4998
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF_Teneurin
EGF_TEN
Fn3_VIN3
EGF_2
EGF_Tenascin
DUF7949
Packaging_FI
Motif
Other DBs
NCBI-GeneID:
308355895
NCBI-ProteinID:
XP_080680588
LinkDB
All DBs
Position
15:<41803762..41856202
Genome browser
AA seq
1472 aa
AA seq
DB search
MGLQGTFCFPLGLLVGSVFLVASAPATLEPHGCSDKEQQVTVSHTYKIDVPKSALVQVET
DPQPLSDDGASLLAPGEAEEQNIIFRHNIRLQTPQKDCELAGSVRDLLARVMKLEEEVAE
MREKCNVHRCCQGAAGGSPDCSGHGTFSPDTCTCRCEQGWEGAACERPACPGACSGHGHC
AAGRCECEPPYVGADCAYPACPDDCSGHGACVRGVCQCHDDFTAEDCSERRCPGDCSGHG
FCDTGECYCEEGFRGLDCAQVVAPQGLQLLRSTEDSLLVSWEPSSEVDHYLLSYYPLGQE
LSGKQIQVPKEQHTYEITGLQPGTKYIVTLRNVKKEVSSSPQHLLATTDLAALGTAWVTD
ETENSLDVEWENPPTEVDYYKLQYGPLTGQEVAEVTVPKSSDPKSRYDITGLQPGTEYKI
TVVPMKGELEGKPILLNGRTEIDSPTNVVTDRVTEDTAVVSWVPVQAVIDKYVVRYTSAD
GDTKDTAVPREQSSTILTGLKPGEAYKVYVWAERGNQESKKADTNALTEIDSPTNLATDR
VTEDTATVSWDPVQAVIDKYMVRYTSADGDTREVSVGKEQSSTILMGLRPGVEYTVQVWA
QKGDRESKKADTKAPTEIDSPQNLVTDRVTEDTATISWDPVRAAIDKYMVRYTSADGDTR
EVSVGKEQSSTVLTGLRPGVEYTVQVWAQKGDRESKKADTKAPTDIDSPTNLVTDRVTEN
TATISWDPVQAVIDKYMVRYTSADGDTREVSVGKEQSSTILTGLRPGVEYTVQVWAQKGA
QESKKADTKAPTDIDSPTNLVTDRVTEDTATISWDPVQAVIDKYMVRYTSANGDTREVSV
GKEQSSTILTGLMPGVEYTVQVWAQKGDRESKKADTKAPTEIDSPQNLVTDRVTEDTATI
SWDPVRAAIDKYMVRYTSADGDTREVSVGKEQSSTILTGLRPGVEYTVQVWAQKGDRESK
KADTKAPTDIDSPKNLVTDQVTEDTATISWDPVQAVIDKYMVRYTSADGDTREVSVGKEQ
SSTVLTGLRPGVEYTVQVWAQKGTQESKKADTKAPTEIDSPKNLVTDQVTEDTATVSWDP
VRAVIDKYMVRYTSADGDTREVSVGKEQSSTVLMGLRPGVEYTVQVWAQKGDRESKKADT
KALTDIDPPRNLRPSAVTQSGGVLTWTAPSAQIDGYILTYQLPDGTVKEVQLRRGDERLE
LQDLEQGITYPVSLVAFKGDRRSRSVSTSLSTVGARFPHPADCSQVQQNSNVASGMYTIY
LHGDSRRPLQVYCDMDTDGGGWIVFQRRNTGQLDFFKRWRTYVEGFGDPMKEFWLGLDKL
HNLTTGTPTRYEVRVDLQTANESAYAVYDAFQVASSKERYRLSVGKYRGTAGDALTYHNG
WKFTTFDRDNDIALSNCALTHHGGWWYKNCHLANPNGRYGETKHSEGVNWEPWKGHEFSI
PYVELKIRPHGYSGEQVLGRKKRTLGENSRTF
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgggtctccaggggacattctgcttccccctgggactcctcgttggctctgtgtttttg
gtggcatcagccccagccactctcgaacctcatggctgcagcgacaaggagcaacaggtc
accgtcagccacacctacaagattgatgtgcccaagtctgcactggtccaggtggagact
gaccctcagcccctcagcgatgatggggcctcactcctggccccaggggaggctgaggaa
cagaacatcatcttcaggcacaacatccgcctgcagacgccacagaaggactgtgagctg
gcaggcagtgtccgagacctcctggcccgggtgatgaagttggaggaggaggtggcagag
atgagggagaagtgcaatgtccaccgctgctgccaaggcgctgctggtgggagccccgac
tgcagcggccacgggaccttctcgccggacacctgcacctgccgctgcgagcagggctgg
gagggcgcggcgtgcgagcggcccgcctgccccggggcgtgcagcggtcacgggcactgc
gccgccggccgctgcgagtgcgagccgccctacgtgggcgccgactgcgcctaccccgcc
tgccccgacgactgcagcggccacggcgcgtgcgtgcgcggcgtctgccagtgccacgac
gacttcaccgccgaggactgcagcgagcgtcgctgccccggcgactgcagcggccacggc
ttctgcgacacgggcgagtgctactgcgaggagggcttcagaggcctcgactgcgcccag
gtggtggctccccagggcctgcagctgctcaggagcacggaggattccctgctggtgagc
tgggagccctccagcgaggtggaccactacctcctcagctactaccctctggggcaggag
ctctctgggaagcagatccaagtgcccaaggagcagcacacctacgagatcaccggtttg
cagcctggaaccaagtacatagttaccctgcgcaatgtgaagaaagaagtttccagcagc
ccacagcatctgcttgccacaacagatcttgccgcacttggcactgcgtgggtgacggat
gagacagagaactcgcttgacgtggagtgggagaaccccccgaccgaggtggactactac
aagctgcagtatggacccctcacagggcaggaggtggccgaggtcactgtgcccaagagc
agtgaccccaagagccgctatgacatcacaggtctgcagcccgggacagaatacaagatc
accgttgttcccatgaaaggagaactggagggcaagccgattctcctgaacggcaggaca
gaaattgatagcccaaccaatgtggtcactgatcgggtgacagaagatacagcggtggtc
tcctgggtccccgtccaggctgtcatagataagtatgtggtacgctacacctctgccgat
ggggacacgaaggacacggccgtcccaagggagcagagcagcaccattctgacaggcctg
aagccaggagaggcgtacaaagtctacgtgtgggctgagagaggcaaccaggagagcaag
aaggctgacaccaacgccctcacagaaattgacagccccacaaatctggccaccgatcgg
gtgacagaggacacggccaccgtctcctgggacccagtgcaagctgtcatcgacaagtat
atggtgcgctacacctctgccgatggcgacacccgggaggtgtctgtggggaaggagcag
agcagcaccatcctgatgggcctgaggccgggtgtggagtacacggtccaggtgtgggcc
cagaagggggaccgggagagcaagaaggccgacaccaaggccccgacagaaattgacagc
ccccaaaacctagtgaccgaccgggtgacagaggacacggccaccatctcctgggaccca
gtgcgagccgccatcgacaagtatatggtgcgctacacctcggccgatggtgacacccgg
gaggtttctgtggggaaggagcagagcagcaccgtcctgacgggcctgaggccgggtgtg
gagtacacagtccaggtgtgggcccagaagggggaccgggagagcaagaaggccgacacc
aaggcccccacagacattgacagcccaacaaacctggtgactgaccgggtgacagagaac
acagccaccatttcctgggacccggtgcaggctgtcattgacaagtatatggtgcgctat
acctcggctgatggagacacccgggaggtgtctgtggggaaggagcagagcagcaccatc
ctgacaggcctgaggccgggtgtggagtacacggtccaggtgtgggcccagaagggggcc
caggagagcaagaaggctgataccaaggccccaacagacatcgacagcccaacaaacctg
gtgactgaccgggtgacagaggacacggccactatctcctgggacccagtgcaagctgtc
atcgacaagtatatggtgcgctacacctcggccaatggcgacacccgggaggtgtctgtg
gggaaggagcagagcagcaccatcctgacgggcctgatgccgggtgtggagtacacggtc
caggtgtgggcccagaagggggaccgggagagcaagaaggccgacaccaaggccccgaca
gaaattgacagcccccaaaacctagtgaccgaccgggtgacagaggacacggccaccatc
tcctgggacccagtgcgagccgccatcgacaagtatatggtgcgctacacctcggctgat
ggtgacacccgggaggtttctgtggggaaggagcagagcagcaccatcctgacgggcctg
aggccgggtgtggagtacacggtccaggtgtgggcccagaagggggaccgggagagcaag
aaggccgacaccaaggcccctacagacattgacagccccaaaaacctggtgaccgaccag
gtgacagaagacacggccaccatctcctgggacccagtgcaagccgtcatcgacaagtat
atggtgcgctacacctcagctgatggcgacacccgggaggtgtccgtggggaaggagcag
agcagcaccgttctgacaggcctgaggccgggtgtggagtacacggtccaggtgtgggcc
cagaaggggacccaggagagcaagaaggccgacaccaaggccccgacagaaattgacagc
cccaaaaacctggtgaccgaccaggtgacagaggatacggccaccgtctcctgggaccca
gtgcgagccgtcatcgacaagtatatggtgcgctacacctcggccgatggtgacacccgg
gaggtgtctgtggggaaggagcagagcagcaccgtcctgatgggcctgaggccgggtgtg
gagtacacggtccaggtgtgggcccagaagggggaccgggagagcaagaaggccgacacc
aaggcccttacagacatcgaccctcccagaaaccttcgtccatcggctgtcacccagtct
ggaggggtgctgacctggacagccccctctgctcagatcgatggctacattctcacctac
cagctcccagatggcaccgttaaggaggtacagctgagaagaggggacgagaggcttgag
ttgcaagaccttgagcagggcatcacctaccctgtctccttggtcgcctttaagggtgat
cgacggagcaggagtgtatccaccagcctttccacagttggtgcgcgtttcccacatcct
gcggactgcagtcaagttcagcagaacagcaatgtcgccagtggtatgtacaccatctac
ctgcacggagactccaggcggcccctgcaggtgtactgcgacatggacacggacggaggc
ggctggatcgtcttccagaggcgcaacacggggcagctggatttcttcaagcgctggcgg
acctacgtggaaggctttggggaccccatgaaggagttctggcttggactcgacaagcta
cacaatctcaccactggcacccctacccgctacgaggtgagagtggacctccagaccgcc
aacgagtccgcctacgccgtgtacgatgccttccaggtggcctccagcaaggagcggtac
cggctctccgttgggaaatacagaggcacagcaggggacgctctgacttaccacaatgga
tggaagtttacaactttcgacagagacaatgatatcgccctcagcaactgtgccctgacc
catcacggtggctggtggtacaagaactgccacttggctaaccccaatggcagatacggg
gagaccaagcacagtgagggggtgaactgggagccgtggaaaggacatgaattctccatt
ccttatgtggagctgaaaatccgccctcatggctacagcggggagcaagtcctgggcaga
aagaagcggacactaggagaaaattcgagaacgttctga
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