Martes martes (European pine marten): 308356374
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Entry
308356374 CDS
T12008
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6 isoform 1
KO
K11292
transcription elongation factor SPT6
Organism
mmaq Martes martes (European pine marten)
Brite
KEGG Orthology (KO) [BR:
mmaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmaq03021
]
308356374 (SUPT6H)
03036 Chromosome and associated proteins [BR:
mmaq03036
]
308356374 (SUPT6H)
Transcription machinery [BR:
mmaq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
308356374 (SUPT6H)
Chromosome and associated proteins [BR:
mmaq03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
308356374 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
308356374
NCBI-ProteinID:
XP_080681426
LinkDB
All DBs
Position
16:complement(23263285..23296736)
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggccgaggagtcggaggaagagtacaatgatgaaggc
gaagtggtgccccgagtcaccaagaaatttgtggaagaggaggatgacgatgaggaggag
gaggaggagaacctagatgatcaggatgagcaaggcaatctgaaaggctttatcaatgat
gatgacgatgaagatgaaggggaggaggatgagggtagtgactctggtgattcagaagat
gatgttggccacaagaagagaaaacgcacatcttttgatgaccgcctggaggatgatgat
tttgacctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaaatatcgacgt
gtcaaaaaaatgtcagatgatgaggatgatgacgaggaggaatatggcaaagaagaacat
gaaaaagaggcaattgcggaggaaatcttccaggatggagaaggggaagaagggcaggaa
gccgtggaggcccccatggctcctccagaggaggaggaggaagatgatgaagaatcagac
attgatgacttcattgtggatgatgatggacagcctctgaaaaagcctaagtggcggaaa
aagcttcccggatacacagatgcggccctgcaggaagcccaggagatttttggtgtggac
tttgactatgacgagtttgagaaatataatgagtacgatgaagaactggaggaagagtat
gagtacgaggatgatgaggctgagggtgagatccgcgtgcgccccaagaagaccaccaag
aaacgtgtgagccgcaggagcatcttcgagatgtacgagcccagcgagctagaaagcagc
cacctcacggatcaggacaatgaaatccgggccacagacctgcctgagagattccagctc
cgctccatcccagttaagggggctgaagatgatgaactagaagaagaagctgactggata
tacaggaatgcctttgccacaccaaccatttctctgcaggaaagctgtgattacctagac
cgagggcagccaaccagcagcttcagtcgaaaaggacccagcacaattcagaagattaaa
gaagccctaggcttcatgcgaaatcaacactttgaggtgccttttattgctttctaccgt
aaagaatatgtggagcctgagttgcacatcaatgacctttggagggtgtggcagtgggat
gaaaagtggacccaactgaggatccgcaaagagaacctaacacggctgtttgagaagatg
caggcttaccagtatgagcaaatttccgctgaccctgataaaccccttgctgatggcatc
cgggctctggataccaccgacatggagaggcttaaggatgtgcagtcaatggatgaacta
aaagatgtctacaaccatttcttgctttattatggccgtgatatccccaagatgcagaat
gccgccaaggccagccgcaagaagctgaagcgtgtacgggaagagggagatgaggaaggt
gagggtgaagaggcagaagatgaggagcagaggggcccagagctcaagcaggcctcccgc
cgagacatgtacaccatctgccagagtgctgggctagatggtctggccaaaaagttcggg
cttactcctgagcagttcggggaaaacctccgggacagctaccagcggcatgagacagag
cagttccctgcggagcctttggagctggccaaggattacgtttgcagccagttccctaca
ccagaagctgtgttggaaggtgcccgctacatggtagccctgcagattgcccgagagccc
ctcgtccgacaggtgctgaggcaaaccttccaggagagagccaaactcaatataaccccc
accaagaaaggtagaaaggatgtggatgaggcccactacgcttattccttcaagtactta
aagaacaagcctgttaaggaactgagagatgaccagttcctcaagatatgcttggctgaa
gatgaggggctgctcaccattgacatcagcatagacatgaagggggtagaaggctacggc
aatgaccagacatatttcgaagagatcaaacagttttactaccgagatgagttcagccac
caggtgcaggagtggaaccggcagcgcaccatggccatcgaacgggctttgcagcagttc
ctctatgtacagatggccaaagagctcaagaacaagttgctggcagaagccaaagaatat
gtcataaaggcctgtagtcggaaactctacaactggttgagggtcgcaccttaccggcca
gatcagcaggtagaggaagatgatgactttatggatgagaaccaagggaagggcatccgc
gttctaggcattgctttctcctctgccagagatcaccctgtgttctgcgccttggtcaat
ggcgaaggagaagtgacagacttccttcggctgccccattttaccaaacggcgaaccgcg
tggagagaggaagaacgggaaaagaaggctcaagatattgaaaccctaaagaaatttctt
ctgaacaaaaagcctcatgtggtgacagtcgcaggagaaaacagggacgcccagatgttg
attgaagatgtgaagcgcattgtgcatgaactggaccagggccaacagctgtcctctatt
ggggtggagctggttgataatgagttggccattctctatatgaacagcaagaaatcagag
gcagagttccgggattaccctccagtgctgagacaggctgtctccctggcccggcgcatc
caggaccctctgattgaatttgcccaggtgtgcagctctgatgaagacatcctgtgtctc
aagtttcatcccttgcaggagcacgtggtgaaagaggagctgctcaacgccttgtactgt
gaatttatcaaccgagtcaatgaggttggggtcgatgtcaaccgtgccattgcccaccca
tacagccaggccttaatccaatatgtctgtggcctgggacctcgaaaagggacacatctc
ctcaagatcctgaagcaaaacaacaccaggctcgagagccggacccagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagatcgacacggcc
tccctgggggacagcactgactcatacattgaagttcttgatggttcccgagtccaccct
gagacctatgagtgggccaggaagatggcagtggacgctctggaatatgatgaatcagct
gaggacgccaaccctgcgggagccctcgaagagatcttggaaaacccggagcgactcaag
gacctggaccttgatgcctttgcagaagaactggagaggcagggctatggcgacaaacac
atcaccttgtatgacatccgggcggagctaagctgccggtataaggacctccggacagcc
taccgctctcccaacacagaggaaatattcaatatgttaaccaaagaaacaccagagacc
ttctacattggaaagctcatcatctgcaacgtcactggcattgcccacaggcgtccccag
ggtgagagctatgaccaggcgatccgcaatgatgagacagggctctggcagtgccccttc
tgtcagcaagacaatttccctgaactcagtgaggtctggaaccactttgacagcggttcg
tgccccggccaggccattggcgtcaaaacacggctagacaatggtgtcaccggcttcatc
cccaccaaattcctcagtgacaaagtggtaaagcggccagaggagcgagtgaaggtggga
atgactgttcactgccgcatcatgaagattgacattgagaagttcagcgccgaccttacc
tgccgaacctcagacctcatggacaggaacaatgagtggaaactgcccaaggacacctac
tatgactttgacgccgaagcagcagaccacaagcaggaggaggacatgaaacggaagcag
cagcggaccacatacatcaagcgagtgatcgcacacccatctttccataatataaacttc
aagcaagcagaaaagatgatggagaccatggaccagggtgatgtgatcatccgccccagt
agcaagggtgaaaatcacctgacagtgacctggaaggtcagcgacggcatctaccaacac
gtggacgtccgggaagaaggcaaggaaaatgccttcagcctgggagccaccttgtggatc
aatagtgaggaatttgaagacttggatgagattgttgctcgctatgtccagcccatggca
tcctttgcccgcgacctcctgaaccacaagtattatcaggactgcagtggtggtgaccgt
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttat
ttcatctgtgcctgcaaggaactgcccggcaagttcctcctgggataccagccccggggt
aaacccaggatagaatatgtaacagtgactcccgaaggattccggtaccggggccaaatc
ttccctactgtgaatggacttttcagatggtttaaggatcactaccaggatcccgtaccg
ggcatcacccccagtagcagcagcaggacccggacacctgcttctatcaatgccacccca
gccaacatcaaccttgcagatctgacgcgagctgtgaatgccttgccccagaacatgacc
tcccagatgttcagtgccattgcagccgtgacaggccaaggacagaaccctaatgccacc
ccagcccagtgggcctccagccaatatggctatggtggcagtggaggaggcagcagcgct
taccatgtattcccaacgccagcccagcagccagtggccacaccactaatgacccccagc
tactcctacacaacccccagccagcccatcaccacaccacagtaccaccagctccaggcc
agcaccaccccccagtctgcccaggcccagccccaaccttcttccagctctcggcaacgg
cagcagcagccaaagtccaacagccatgccgccatcgactgggggaagatggcagagcag
tggctacaggagaaggaagccgagaggcggaaacagaagcagcggctgacacctcgaccc
tctcccagccccatgatcgaaagcacccccatgtccattgccggcgatgccaccccgctc
ctggatgagatggatcggtag
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integrated database retrieval system
