Martes martes (European pine marten): 308358296
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Entry
308358296 CDS
T12008
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
mmaq Martes martes (European pine marten)
Pathway
mmaq04514
Cell adhesion molecule (CAM) interaction
mmaq04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mmaq00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
308358296 (LRRC4B)
04517 IgSF CAM signaling
308358296 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmaq04515
]
308358296 (LRRC4B)
Cell adhesion molecules [BR:
mmaq04515
]
Immunoglobulin superfamily
NGL family
308358296 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
ig
LRR_9
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
DUF7617
Ig_MYOM1
Motif
Other DBs
NCBI-GeneID:
308358296
NCBI-ProteinID:
XP_080684586
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All DBs
Position
17:complement(52411998..>52432749)
Genome browser
AA seq
712 aa
AA seq
DB search
MACARSSPCLPLLPGRMSWPHGALLFLWLFSPPLGAGGGGVAITLAAGGGSPPATSCPAA
CSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKN
LVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR
VPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNR
LDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPL
HRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFT
CYAPVIVEPPTDLNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGT
LNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAAGGAGGPGGPGGPGGGGGGS
GGYTYFTTVTVETLETQPGEETLQPRGTEKEPPGPTTDGVWGGGRPGDAAGPASSSTTAP
APRSSRPTEKAFTVPITDVTENALKDLDDVMKTTKIIIGCFVAITFMAAVMLVAFYKLRK
QHQLHKHHGPTRTVEIINVEDELPAASAVSVAAAAAVAGAGGVGGDSHLALPALERDHLN
HHHYVAAAFKAHYSGNPSGGGCGGKGPPGLNSIHEPLLFKSGSKENVQETQI
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcgcccgcagctccccgtgcctcccactgctgcccggtaggatgtcctggccc
catggggccctgctcttcctctggctcttctccccacccctgggggccggcgggggcggc
gtggccataacattggcggccggagggggctccccaccggccacctcctgccccgcggcc
tgctcctgcagcaaccaggccagccgggtgatctgcacacggagagagctggctgaggtc
ccggccagcatccctgtcaacacgcggtacctgaacctacaggagaatggcatccaggtg
atccgcaccgacacgttcaagcacctgcggcacctggagatcctgcagctgagcaagaac
ctggtgcgcaagatcgaggtgggcgccttcaacgggctgcccagcctcaacacgctggag
ctgttcgacaaccggctcacgacggtgcccacgcaggccttcgagtacctgtccaagctg
cgggagctctggctgcgcaacaaccccatcgagagcatcccctcgtacgccttcaaccgc
gtgccgtccctgcggcgcctggacctgggcgagctcaagcggctggagtacatctcggag
gcggccttcgagggcctggtcaacctgcgctacctcaacctgggcatgtgcaacctcaag
gacatccccaacctgacggccctggtgcgcctggaggagctggagctgtcgggcaaccgg
ctggacctgatccgcccgggctccttccagggcctcaccagcctgcgcaagctgtggctc
atgcacgcccaggtggccaccatcgagcgcaacgccttcgacgacctcaagtcgctggag
gagctcaacctgtcccacaacaacctgatgtcgctgccccacgacctcttcacgcctctg
caccgcctggagcgcgtccacctcaaccataacccctggcactgcaactgcgacgtgctc
tggctgagctggtggctcaaggagacggtgcccagcaacacgacgtgctgcgcccgctgc
cacgcgcccgccggcctcaagggccgctatatcggcgagctggaccagtcacacttcacc
tgctacgcgccggtcatcgtggagccgcccacggacctgaacgtcaccgagggcatggcg
gccgagctcaagtgccgcacgggcacctccatgacctccgtcaactggctgacgcccaac
ggcaccctcatgacccacggctcctaccgcgtgcgcatctccgtcctgcacgacggcacg
ctcaacttcaccaacgtcacggtgcaggacacgggccagtacacgtgcatggtgacgaac
tcggccggcaacaccaccgcctcggccacgctcaacgtctcggccgtggaccccgtggcg
gccggcggtgccggcggcccgggcggcccgggcggcccgggcggcggcgggggcggcagc
ggcggctacacgtacttcaccaccgtaaccgtggagaccctggagacgcagccgggagag
gagaccctgcagcctcgggggacggagaaggagccgccggggcccacgacggacggtgtc
tggggcgggggccggcccggggacgccgccggccccgcctcgtcgtccaccacggcgccc
gccccgcgctcctcgcggcccacggagaaggcgttcacggtgcccatcacggacgtgacg
gagaacgccctcaaggacctggacgacgtcatgaagaccaccaagatcatcatcggctgc
ttcgtggccatcacgttcatggccgccgtgatgctcgtggccttctacaagctgcgcaag
cagcaccagctccacaagcaccacgggcccacgcgcacggtggagatcatcaacgtggag
gacgagctgcctgccgcctcggccgtgtcggtggccgctgccgccgccgtggccggcgcg
gggggcgtcggcggggacagccacctggccctgcccgccctggagcgcgaccacctcaac
caccaccactacgtggcggccgccttcaaggcgcactacagcggcaaccccagcggcggg
ggctgcgggggcaagggccccccagggctcaactccatccacgaacctctgctcttcaag
agtggctccaaggagaacgtgcaagagacgcagatctga
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