Martes martes (European pine marten): 308359536
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Entry
308359536 CDS
T12008
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 isoform 1
KO
K13175
THO complex subunit 6
Organism
mmaq Martes martes (European pine marten)
Pathway
mmaq03013
Nucleocytoplasmic transport
mmaq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmaq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308359536 (THOC6)
09122 Translation
03013 Nucleocytoplasmic transport
308359536 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmaq03019
]
308359536 (THOC6)
03041 Spliceosome [BR:
mmaq03041
]
308359536 (THOC6)
Messenger RNA biogenesis [BR:
mmaq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
308359536 (THOC6)
Spliceosome [BR:
mmaq03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
308359536 (THOC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_NOL10_N
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_EML_2
WD40_Gbeta
NBCH_WD40
Beta-prop_IP5PC_F
Beta-prop_CAF1B_HIR1
WDR54
EIF3I
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
ASA1
TRM82_WD
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
CFAP251_N
DSE1_N
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
308359536
NCBI-ProteinID:
XP_080686750
LinkDB
All DBs
Position
18:complement(38837497..38840646)
Genome browser
AA seq
341 aa
AA seq
DB search
MERAVPHAVPLGQMEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPVVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEILKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGAFTRALRGHTDYIHCLALRERS
PEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTIFPMRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagctgtgccacacgcggtacctctgggtcagatggaagtgtttcaggccctg
cagcggctccacatgaccattttctcccagagtgtctcaccctgtgggaagttccttgca
gctggcaacaattacgggcagatagccatcttcagcttgtctgctgctttgagctctgag
gccaaagaagaaagtaagaagcccgtggtcacattccaagcccatgatgggcctgtctac
agcatggtctccactgatcgacacctgctcagtgctggggatggggaggtgaaggcctgg
ctttgggcagagatcctcaagaagggctgtaaggagctgtggcggcgtcagcctccgtac
aggaccagtctcgaagtgcctgagatcaatgctttgcttctcgtccccaaggagaattct
ctcatcctggcagggggagactgtcagttgcatacgatggaccttgagactggggccttc
acacgggctctccggggccacacagactatatccactgcctggcactgcgggagcggagc
cccgaggtgctgtcgggtggtgaggatggagccgtgcgactgtgggacctccgcacagcc
aaggaagtccagaccatcgaggtgtataagcatgaggagtgctcgagaccccacaatggg
cgttggatcggatgtctggcaactgactcagactggatggtctgtggaggcggcccagca
ctcaccctctggcacctccgatcctccacgcccaccaccattttccccatgcgggcacca
cagaaacacgtcaccttctaccaggacctgattctgtctgctggccagggccgctgtgtc
aaccagtggcagctgagtggggagctcaaggcccaggtgcctggctcctccccagggctg
cttagccttagtctcaaccagcagccagcagcacccgagtgcaaggtcctgacagccgcg
ggtaacagctgccgggtggatgtcttcaccaatctgggctaccgcgccttctccctgtcc
ttctga
DBGET
integrated database retrieval system
