Modestobacter italicus: MODMU_0827
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Entry
MODMU_0827 CDS
T02167
Name
(GenBank) Putative DNA helicase, superfamily II
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mmar
Modestobacter italicus
Pathway
mmar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MODMU_0827
09124 Replication and repair
03420 Nucleotide excision repair
MODMU_0827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmar03021
]
MODMU_0827
03400 DNA repair and recombination proteins [BR:
mmar03400
]
MODMU_0827
Enzymes [BR:
mmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MODMU_0827
Transcription machinery [BR:
mmar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MODMU_0827
DNA repair and recombination proteins [BR:
mmar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MODMU_0827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
CCH86278
UniProt:
I4ESB5
LinkDB
All DBs
Position
complement(824605..826290)
Genome browser
AA seq
561 aa
AA seq
DB search
MSDGPLIVQSDKTLLLEVDHPQSKECRAAIAPFAELERSPEHVHTYRVTPLALWNARAAG
HDAEQVVDALVRYSRYPVPHALLVDIADTMDRYGRLTLANNPVHGLTLTSTDRAVLEEVV
RSKRVAPMLGARIDADSVAVHPSERGRLKQALLKIGWPAEDLAGYVDGQAHPISLAQDDW
HLRDYQQEAVDGFWAGGSGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTVSGRQWKRE
LIARTSLTEEEIGEYSGERKEIRPVTIATYQVITTRRKGEYRHLDLFDAQDWGLIVYDEV
HLLPAPIFRLTADLQSRRRLGLTATLVREDGREDDVFSLIGPKRYDAPWRDIEAQGYIAP
AECIEVRVSLDDEERMTYAVAEPEERYRIAATAQSKLPVIRRVLERHPDEQKLVIGAYLD
QLDELGTALDAPVIQGSTTNTERERLFQAFRVGEIKTLVVSKVANFSIDLPEAAVAVQVS
GTFGSRQEEAQRLGRVLRPKADGRQAHFYTVVSRDTLDSEYAAHRQRFLAEQGYAYTIVD
AADLAGPGEVNGPDWVDEPAD
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacggccccctgatcgtccagtccgacaagacgttgctgctcgaggtcgaccac
ccgcagtccaaggagtgccgggcggcgatcgccccgttcgccgagctggagcgctccccc
gagcacgtgcacacctaccgggtcaccccgctggcgctgtggaacgcgcgggccgcgggc
cacgacgccgagcaggtcgtcgacgcgctggtgcggtactcgcgctaccccgtgccgcac
gccctgctggtcgacatcgccgacacgatggaccgctacggccgcctcaccctggccaac
aacccggtgcacgggctcacgctgaccagcaccgaccgcgccgtgctggaggaggtcgtc
cgcagcaagcgggtggccccgatgctcggtgcccggatcgacgccgactcggtcgccgtc
cacccctccgagcgcggccggctcaagcaggcgctgctgaagatcggctggcccgccgag
gacctcgccggctacgtcgacggccaggcgcacccgatctcgctcgcccaggacgactgg
cacctgcgggactaccagcaggaggccgtcgacgggttctgggccggcggctcgggcgtc
gtggtgctgccctgcggggccggcaagacgctggtcggcgccgcggcgatggccgaggcc
aaggcgaccacgctgatcctggtcaccaacaccgtctccggccggcagtggaagcgcgag
ctcatcgcccgcacctcgctcaccgaggaggagatcggcgagtactccggcgagcgcaag
gagatccgcccggtcaccatcgccacctaccaggtgatcaccacccgccggaagggcgag
taccggcacctggacctcttcgacgcccaagactggggcctcatcgtctacgacgaggtc
cacctgctcccggcgccgatcttccggctcaccgccgacctgcagtcccgccgtcgcctt
gggctgaccgcgacgctggtccgcgaggacgggcgcgaggacgacgtcttctccctcatc
gggcccaagcggtacgacgccccctggcgggacatcgaggcgcagggctacatcgcgccg
gccgagtgcatcgaggtgcgggtcagcctggacgacgaggagcggatgacctacgccgtc
gccgagcccgaggagcgctaccggatcgcggccaccgcgcagtcgaagctgccggtgatc
cgccgggtgctcgagcggcaccccgacgagcagaagctggtcatcggcgcctacctcgac
cagctcgacgagctcgggacggcgctggacgccccggtgatccaggggtcgacgaccaac
acggagcgcgagcggctgttccaggcgttccgggtcggcgagatcaagaccctggtcgtg
tccaaggtcgcgaacttctccatcgacctgcccgaggccgcggtcgcggtgcaggtgtcg
ggcacgttcggctcccggcaggaggaggcccagcggctcggccgggtgctgcgccccaag
gccgacggccggcaggcgcacttctacaccgtcgtctcccgcgacaccctggacagcgag
tacgccgcgcaccggcagcgcttcctcgccgagcagggctacgcctacacgatcgtcgac
gccgccgacctggccggcccgggcgaggtcaacggccccgactgggtcgacgagcccgcc
gactga
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