Modestobacter italicus: MODMU_2490
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Entry
MODMU_2490 CDS
T02167
Name
(GenBank) RNA polymerase, sigma 54 (sigma N) factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
mmar
Modestobacter italicus
Pathway
mmar02020
Two-component system
mmar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mmar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MODMU_2490
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MODMU_2490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmar03021
]
MODMU_2490
Transcription machinery [BR:
mmar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MODMU_2490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
HTH_23
HTH_31
HTH_Crp_2
MarR_2
HTH_Tnp_ISL3
HTH_38
Fe_dep_repress
HTH_3
Xre-like-HTH
HVO_A0261_N
DUF8452
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CCH87919
UniProt:
I4EX06
LinkDB
All DBs
Position
2453725..2454987
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AA seq
420 aa
AA seq
DB search
MAQGFAHRQLLSPLAVQVLASLTLTQAELDSLVAARLAANPVLVAGTPRRCRWCACTLQL
GRCPRCAGQVTLVHEPVAVEDEIEELRREARLMVRPALAPMVDLVVAQLDERGLLPGPSS
SVEAGARASDEWAEAVRAVRAAGPPGVAAPDVRSCLLDQARWHASNGGPALLVPIVAGHL
GRVAVGDHAEIAGDLGVSTSAVDDAVAFLRARLRPSVLTTGAVAAPVGAPPDVIVRRRGD
GLEVVVLDGADLGLGLDPELDALRLAGDSGEWLADRCADARALLDVVDRRAGALRRVATA
VVHAQRDFVLHGRAAHRPLTRAAVAAALGVHPSTVSRAVQGAVVALPDGGVLPLAAFFGK
AVAVVDCLARMLASPDPPRSDADAVARLGVAGHVVARRTVTKYRHLLDTAAAGRAKRSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggggttcgcccaccggcagctcctgtccccgctggccgtccaggtgttggcg
agcctgaccctgacccaggctgagctcgactccctggtggccgcacgtctggcggcgaac
ccggtgctcgtcgcggggacaccgcgtcgatgccggtggtgtgcgtgcaccctgcagctc
ggccggtgcccgcggtgcgcgggacaggtgacgctggtacacgaacccgtcgcggtcgag
gacgagatcgaggagctgcggcgggaggcgcggctgatggtccgcccggccctcgccccg
atggtcgacctcgtggtggcgcagttggacgagcgaggcctgctgcctggaccgtcgtcg
tccgtcgaggccggcgcacgggcgtccgacgagtgggcggaggcggtccgggcggtgcgg
gccgcgggtccgcccggagtcgcggctccggacgtccggagctgcctcctcgaccaggcc
cggtggcacgcgtcgaacgggggaccggctctcctcgtcccgatcgtcgccgggcacctc
ggccgggtcgccgtgggcgaccacgccgagatcgccggggacctcggtgtgagcacctcg
gcggtcgacgacgcggtggcgttcctgcgggcgagactgcggccctcggtcctgaccacc
ggggcagtggccgccccggtaggggctcctccggacgtcatcgtccggcgccggggagac
ggcctggaggtggtcgtgctcgacggcgccgacctcggactgggcctcgatccggagctc
gatgcgctccggctggcaggcgacagcggtgagtggctggccgaccggtgcgctgacgcc
cgggccctgctggacgtcgtcgaccgacgcgccggtgcgctgcgcagggtggccactgcg
gtggtgcacgcccagcgggacttcgtcctgcacggccgcgccgcgcaccggccgttgacc
cgcgcggccgtcgcggccgccctgggagtgcacccgtcgacggtgagccgcgccgtgcag
ggcgccgtcgtcgcgctgccggacggcggcgtcctgccgctcgccgcgttcttcggcaag
gccgtggcggtcgtcgactgcctggcccggatgctcgcgtcgccggacccgccccgcagc
gatgccgacgccgtggcccggttgggcgtcgccgggcacgtcgtcgcccggcggacggtg
acgaagtaccgccacctgctcgacaccgccgctgccggccgtgcgaagcgatcttctccc
tga
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