Modestobacter italicus: MODMU_4109
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Entry
MODMU_4109 CDS
T02167
Name
(GenBank) Putative exonuclease, RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mmar
Modestobacter italicus
Pathway
mmar03030
DNA replication
mmar03430
Mismatch repair
mmar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MODMU_4109
03430 Mismatch repair
MODMU_4109
03440 Homologous recombination
MODMU_4109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmar03032
]
MODMU_4109
03400 DNA repair and recombination proteins [BR:
mmar03400
]
MODMU_4109
Enzymes [BR:
mmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MODMU_4109
DNA replication proteins [BR:
mmar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MODMU_4109
DNA repair and recombination proteins [BR:
mmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MODMU_4109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
PTCB-BRCT
Rv2179c-like
TerB
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CCH89510
UniProt:
I4F1J7
LinkDB
All DBs
Position
complement(4080513..4081799)
Genome browser
AA seq
428 aa
AA seq
DB search
MSIAVVDLETTGVLPSVDRVVEVGVVLLDDAGTVEHEFATLVDPGRDIGPTSVHGIHASD
VIGAPTFAEVAPYLASLLSGRVVVAHNALFDLRFLGREFSRAGLSVELTPALCTMRLAGT
FDRSLRSLASVCETLSIANNQAHTALADARATAAALVRMRETLGELALLDAALAVDFDHD
GSYLGSRSVAARDWRALVTDVTLSRRPFIDPCRSVTRSAAQANVRERNGYLAALVSALPE
ITGAPATMAPYLAVLDQVLEDRLVSVSEADQLMTLAGELGCGPTHVSAAHRLYLDALATV
ALADDVVTDTERADLDRVAVLLGLTSGDVDIALTMVRSGARVSVPHRPSGLSNGDRIVFT
GEMSRSRSDLEEAARAAGLEPVASVSKKTNVLVCADPDSQSGKARKARALGVRVISEPVF
WESLALVG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgccgtcgtcgacctcgagaccaccggtgtgctgcccagcgtcgatcgggtc
gtggaggtcggggtcgtcctgctggacgacgccgggacggtggagcacgagttcgcgacg
ctggtcgacccaggtcgcgacatcggtccgacctcggtccacggcatccacgcatcggac
gtcatcggcgcgccgaccttcgccgaggtcgctccctacctggcctccctgctgtccggc
cgggtggtggtggcccacaacgctctgttcgacctgcgcttcctcggacgtgagttcagc
cgggccggcctctccgtcgagctcaccccggcgctgtgcacgatgcgactcgcgggcacg
ttcgaccgatcgctccggtcgctggcctccgtgtgcgagaccttgtcgatcgccaacaac
caggcgcacaccgcgctggccgatgcccgggcgaccgcggcggcgctggtgcggatgcgg
gagacgctcggcgagctcgccctgctcgatgccgcgctggccgtggacttcgaccacgac
ggcagctacctcggctctcggtccgtggctgcgcgtgactggcgagcgctcgtcaccgac
gtcacgctgagccgacgcccgttcatcgacccgtgtcgcagcgtcactcgttctgcagcc
caggcgaacgtccgggagcgcaacgggtacctggctgctctcgtgtccgcgctgcctgag
atcaccggagcgccggccacgatggccccctacctggccgtgctcgaccaggtcctcgag
gaccgcctcgtcagcgtcagtgaagcggaccagctgatgaccctcgccggcgagctcggc
tgcgggccgacgcacgtgtcggcggcccaccgcctctacctcgacgcgctggccacggtg
gccctggctgacgatgtcgtcaccgatacggagcgcgcagacctggatcgggtcgccgtc
ctgctggggttgacctcgggggacgtcgacatcgcgctgaccatggtccggtccggtgcc
cgtgtgtcggttccgcaccgccccagcggcctgtcgaacggcgaccgcatcgtgttcacc
ggcgagatgtcgcgctcgaggtccgacctcgaggaggccgctcgggctgccgggctggag
ccggtggcctcggtgtcgaagaagaccaatgtgctggtctgcgccgaccccgattcccag
tcaggcaaggcgcggaaagcgcgggccctcggtgtccgggtgatcagcgagcccgtgttc
tgggagtccctggcgctggtcggctga
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