Modestobacter italicus: MODMU_4338
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Entry
MODMU_4338 CDS
T02167
Name
(GenBank) Hydrolase of the metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mmar
Modestobacter italicus
Pathway
mmar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MODMU_4338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmar03019
]
MODMU_4338
Messenger RNA biogenesis [BR:
mmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MODMU_4338
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
CCH89733
UniProt:
I4F270
LinkDB
All DBs
Position
complement(4328614..4330320)
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AA seq
568 aa
AA seq
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MTTSSLTVQPHLDLKAPPPLPKGGLRVMALGGLGEIGRNMAVLEFDGQLMVIDCGVLFPE
AEQPGIDLILPDFGVIEHRLQDITAVVLTHGHEDHIGAVPYLLRLRADIPLVGSRFTLAL
VKAKLREHRIDPVLVEVAAGDDHLAGPFHCEFISVNHSIPDALAVAVHTPAGTLVHTGDF
KMDQLPLDGVLTDLGAFARLGVEGIDLLLADSTNAEVPGFVTSERNIGPVLDSVFERASQ
RLIVSSFASHVHRIQQVLDCAVKHKRKVALVGRSMVRNMGVAQDLGLLRVAPGLMVKLDE
ATAMPPEQVVLISTGSQGEPLSALGRMARGDHHQVTIEAGDTIILASSLVPGNETAVYKV
INGLARLGATVIHKETAMVHVSGHAPAGELRTLINVAKPRYLMPVHGEWRHLRAHAALAE
QTGMTADRILLAEDGVVVDLVDGKATIVGSVPIGNVYVDGLNVGDVGEESLQARRILGDE
GFVALTVVIEPSTRTIVRPVHLSTRGFSDDPSAFTEVLALVEKELKRAMEDEQVDAHRLS
QVIRRTVGKWVSDKYRRRPMIIPTVLEV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacctcctccctgaccgtgcagccgcacctcgacctcaaggccccgccgccgctg
ccgaagggcggcctgcgggtgatggccctcggcgggctcggcgagatcggccgcaacatg
gccgtgctggagttcgacggccagctgatggtcatcgactgcggggtgctcttccccgag
gccgagcagcccggcatcgacctgatcctgcccgacttcggggtcatcgagcaccggctg
caggacatcaccgccgtcgtcctcacccacgggcacgaggaccacatcggggcggtgccc
tacctgctgcggctgcgcgccgacatcccgctggtcgggtcccggttcaccctcgcgctg
gtcaaggccaagctgcgcgagcaccggatcgacccggtgctggtcgaggtggccgccggc
gacgaccacctggccggtccgttccactgcgagttcatcagcgtcaaccactcgatcccc
gacgcgctggccgtggccgtgcacaccccggcggggacgctggtgcacaccggcgacttc
aagatggaccagctgccgctggacggcgtgctcaccgacctgggcgccttcgcgcggctg
ggcgtcgagggcatcgacctgctgctggccgactcgaccaacgccgaggtgcccgggttc
gtcacctccgagcgcaacatcggcccggtgctggactcggtcttcgagcgggccagccag
cggctgatcgtctccagcttcgccagccacgtgcaccgcatccagcaggtgctcgactgc
gcggtcaagcacaagcgcaaggtggccctggtgggccgctcgatggtccgcaacatgggc
gtcgcccaggacctcggcctgctccgggtcgccccggggctgatggtcaagctcgacgag
gcgaccgcgatgccgccggagcaggtggtgctgatcagcaccggctcgcagggcgagccg
ctgtccgcgctgggccggatggcccgcggcgaccaccaccaggtgaccatcgaggccggc
gacacgatcatcctggcgtcctcgctggtgcccgggaacgagaccgccgtctacaaggtg
atcaacgggctggcccggctgggcgccacggtgatccacaaggagacggcgatggtgcac
gtctccgggcacgcccccgccggtgagctgcggaccctgatcaacgtggccaagccgcgg
tacctcatgccggtgcacggcgagtggcggcacctgcgggcgcacgccgcgctggccgag
cagaccgggatgaccgccgaccggatcctgctcgccgaggacggcgtcgtcgtcgacctg
gtcgacggcaaggccaccatcgtcggcagcgtcccgatcggcaacgtctacgtcgacggg
ctcaacgtcggcgacgtcggcgaggagtcgctgcaggcccggcggatcctcggcgacgag
gggttcgtcgcgctcaccgtggtcatcgagccctcgacgcgcaccatcgtccggccggtg
cacctgtccacccggggcttctccgacgacccgagcgccttcaccgaggtgctcgcgctg
gtcgagaaggagctcaagcgggcgatggaggacgagcaggtcgacgcccaccggctgtcc
caggtgatccgccggacggtcggcaagtgggtgtcggacaagtaccgccgccgcccgatg
atcatcccgaccgtcctcgaggtctga
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