Corallococcus macrosporus DSM 14697: MYMAC_003443
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Entry
MYMAC_003443 CDS
T05096
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
mmas
Corallococcus macrosporus DSM 14697
Brite
KEGG Orthology (KO) [BR:
mmas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmas03032
]
MYMAC_003443
03036 Chromosome and associated proteins [BR:
mmas03036
]
MYMAC_003443
03400 DNA repair and recombination proteins [BR:
mmas03400
]
MYMAC_003443
DNA replication proteins [BR:
mmas03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MYMAC_003443
Chromosome and associated proteins [BR:
mmas03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
MYMAC_003443
DNA repair and recombination proteins [BR:
mmas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
MYMAC_003443
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ATB47824
UniProt:
A0A250JVD1
LinkDB
All DBs
Position
4120399..4120725
Genome browser
AA seq
108 aa
AA seq
DB search
MTRSELIERIVERAPHVPRREVEAIVHAVFEQMAQALVAGRRIELRGFGVFVVRTRRART
GRNPKTGQRVSVPARRTLSFAAGKELRERLNAPPATAAGPAFIVPATG
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcagtgagctcatcgagcgcatcgtggagcgtgccccgcatgttccacggcgt
gaggtggaggccatcgtccacgccgtcttcgagcagatggcccaggccctggtggccgga
cggagaatcgagctgcgggggttcggcgtcttcgtcgtccgcacgcgccgggcgcgcacg
ggccgcaaccccaagacggggcagcgcgtgtcggtgccagcgcggcgcaccttgtccttc
gccgccggcaaggagctgcgcgagcggctcaacgccccacccgccacggcggcggggccc
gcgttcatcgtgcccgccacgggttga
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